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21 Open 104 Closed
21 Open 104 Closed
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Issues list

Indels phasing issue
#138 opened Nov 14, 2024 by KonstantinTyurin
1
Release name for 1.3.3 tag wrong
#136 opened Apr 17, 2024 by Flamefire
1
Core dumped
#135 opened Jan 29, 2024 by seynard
VCF with deletions
#134 opened Nov 16, 2023 by dmjask
HapCUT2 does not phase this variant directly adjacent to another and overlapping another other.
#132 opened Oct 26, 2023 by jan-glx
1
Convert block file to vcf after pruning
#131 opened Jul 25, 2023 by pdimens
1
Skip non-diploid or other invalid variants instead of raising error
#128 opened Jan 13, 2023 by pontushojer
Error while running extractHAIRS
#127 opened Nov 16, 2022 by uncleflybfchen
2
calculate_haplotype_statistics.py slightly differs from block headers
#124 opened May 4, 2022 by magnitov
double free or corruption (out)
#121 opened Nov 30, 2021 by tiffuhu
1
error while loading shared libraries: libhts.so.3
#120 opened Nov 23, 2021 by sandipmkale
1
is this tool suitable for Creating a phased VCF of proximal variants?
#119 opened Oct 17, 2021 by gudeqing
1
Is there a docker image for this tool?
#118 opened Sep 18, 2021 by gudeqing
2
Segfault on extracthairs
#115 opened Jun 18, 2021 by klannert
2
Obtaining Phased Haplotypes bug
#111 opened Mar 31, 2021 by psur9757
5
HapCutToVcf result deal
#109 opened Dec 28, 2020 by LILIHAN-001
10X Genomics data in hapCUT2
#90 opened Feb 6, 2020 by burri-wildlight
8
extractHAIRS for polyploids
#82 opened Sep 29, 2019 by sinamajidian
1
hapcut2 linkfragments error
#78 opened Jul 11, 2019 by jakobcmueller
UnicodeDecodeError during linked_fragment_file generation
#77 opened Jun 30, 2019 by chunlinxiao
27
Need help with the validation of the results from HapCUT2 on PacBio+Illumina reads
#66 opened Apr 6, 2019 by marizazh
3
ProTip! What’s not been updated in a month: updated:<2024-10-18.