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minor updates, removing duplicate readme file
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vibansal committed Jun 8, 2021
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102 changes: 0 additions & 102 deletions CRISP.README

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1 change: 1 addition & 0 deletions scripts/convert_pooled_vcf.py
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## coded july 15 2015, code to convert CRISP pooled allele count to genotype 0/0/0/0/0/1 format so that it is compatible with standard tools
## if the sum of allele counts is more than poolsize, program ignores that variant.
## this code works with python version 2.7 (not with 3+ versions)

if len(sys.argv) < 3:
print >>sys.stderr, "\n\nPROGRAM to convert CRISP VCF for pooled samples to a standard VCF where genotypes are in the form 0/0/0/0/0/1";
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