fix Docker build

virtualcell · Sep 10, 2024 · a610480 · a610480
1 parent 8ed22a5
commit a610480
Showing 1 changed file with 11 additions and 2 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -1,8 +1,17 @@
 FROM ubuntu:22.04
 
 RUN apt-get -y update && apt-get install -y apt-utils && \
-    apt-get install -y -qq -o=Dpkg::Use-Pty=0 build-essential gfortran zlib1g-dev \
-    libhdf5-dev libzip-dev ninja-build libcurl4-openssl-dev libboost-all-dev bzip2 cmake wget python3
+    apt-get install -y -qq -o=Dpkg::Use-Pty=0 build-essential gfortran \
+    libhdf5-dev libzip-dev ninja-build libcurl4-openssl-dev libboost-all-dev libbz2-dev cmake python3
+
+# Install an alternative Fortran compiler
+RUN apt-get install -y gfortran-10
+
+# Set the alternative Fortran compiler as the default
+RUN update-alternatives --install /usr/bin/gfortran gfortran /usr/bin/gfortran-10 10
+
+# Fix broken dependencies and reconfigure ca-certificates
+RUN apt-get -y update && apt-get install -f && dpkg --configure -a && apt-get clean
 
 COPY . /vcellroot