Code

generate dataclass by registry#60

Code

Closed

eagmon wants to merge 58 commits intomainvivarium-collective/bigraph-schema:mainfrom pydanticvivarium-collective/bigraph-schema:pydanticCopy head branch name to clipboard

+1,741-504

Commits

Commits on Mar 11, 2024

• add pydantic to the base registry class

  eagmon

  committed
  a231744

• create pydantic model

  eagmon

  committed
  83ed58d

Commits on Mar 12, 2024

• add tree and list to map_type_to_pydantic

  eagmon

  committed
  8695ac4

• more conditionals in map_type_to_pydantic

  eagmon

  committed
  659d3be

Commits on Mar 13, 2024

• begin with test

  eagmon

  committed
  456f6d7

• register_multiple uses strict

  eagmon

  committed
  2f38fe6

Commits on Mar 16, 2024

• replace pydantic with dataclass

  eagmon

  committed
  26b2eea

• Merge branch 'main' into pydantic

  eagmon

  committed
  f3e2249

• value error if not config_schema

  eagmon

  committed
  c1b42f0

• remove generate_dataclass from test since there are no processes with config_Schema in bigraph-schema repo

  eagmon

  committed
  9ebbcdc

• add pytest workflow

  eagmon

  committed
  577b632

• numpy in setup

  eagmon

  committed
  a6afada

• setup

  eagmon

  committed
  4bf1a27

• Merge branch 'notebook' into pydantic

  eagmon

  committed
  39fd1c9

Commits on Mar 17, 2024

• restructure prepare for non-process dataclass support

  eagmon

  committed
  8a371ee

Commits on Mar 19, 2024

• expanding on edges and view/project

  prismofeverything

  committed
  d2e2431

Commits on Mar 21, 2024

• apply for notebook

  prismofeverything

  committed
  d555323

• cleaning up notebook

  prismofeverything

  committed
  3a5d540

Commits on Mar 22, 2024

• notebook

  prismofeverything

  committed
  4bf861d

Commits on Mar 23, 2024

• more core notebook to html

  eagmon

  committed
  edd2a8d

• demo not working

  eagmon

  committed
  9ff79eb

• update readme for core notebook

  eagmon

  committed
  a5affea

• core notebook image from http

  eagmon

  committed
  7bdbf6e

Commits on Apr 5, 2024

• getting units working

  prismofeverything

  committed
  4d7910c

Commits on Apr 12, 2024

• updating base types

  prismofeverything

  committed
  0da1724

Commits on Apr 14, 2024

• lookup string schema

  eagmon

  committed
  c838137

• Merge branch 'main' of https://github.com/vivarium-collective/bigraph-schema

  eagmon

  committed
  4b240c8

Commits on Apr 18, 2024

• working on merge and bind

  prismofeverything

  committed
  902dabd

• turning off set_slice test for now

  prismofeverything

  committed
  dfa9a7e

• set_slice working

  prismofeverything

  committed
  c904d3a

Commits on Apr 19, 2024

• set_slice is working

  prismofeverything

  committed
  4a327df

• resolve conflicts

  prismofeverything

  committed
  6413798

Commits on Apr 23, 2024

• projecting nested structures

  prismofeverything

  committed
  00f754d

• working on slice

  prismofeverything

  committed
  a9eef2e

• working on set_sclie

  prismofeverything

  committed
  1c42e36

• working on nested wires

  prismofeverything

  committed
  e523f04

Commits on Apr 24, 2024

• thought on division

  prismofeverything

  committed
  7846267

• Merge branch 'main' into slice

  prismofeverything

  committed
  8ffeec6

• converting to slice

  prismofeverything

  committed
  e9545a4

• wiring going through set_slice now

  prismofeverything

  committed
  388040c

Commits on Apr 25, 2024

• making slice work

  prismofeverything

  committed
  c50b4c1

• provide transform_path

  prismofeverything

  committed
  27a9a16

• version 0.0.31

  prismofeverything

  committed
  9702ff7

• version 0.0.31

  prismofeverything

  committed
  5f94552

Commits on Apr 29, 2024

• version 0.0.33

  prismofeverything

  committed
  8606f73

• version 0.0.34

  prismofeverything

  committed
  1a3c249

• version 0.0.35

  prismofeverything

  committed
  c4f84c0

Commits on Apr 30, 2024

• working on wires above the top level

  prismofeverything

  committed
  7b4cee7

Commits on May 3, 2024

• moving reactions outside of tests, adding schema and state

  prismofeverything

  committed
  9c35d0d

Commits on May 4, 2024

• division

  prismofeverything

  committed
  5258186

Commits on May 9, 2024

• working on projection to dataclass

  prismofeverything

  committed
  150218f

• basic dataclass working

  prismofeverything

  committed
  c7fafe9

• generating dataclasses from schemas

  prismofeverything

  committed
  e3ede00

• converting to dataclasses

  prismofeverything

  committed
  b27e5f3

Commits on May 10, 2024

• fill in defaults for dataclass

  prismofeverything

  committed
  5c0b33e

• dataclasses release

  prismofeverything

  committed
  4b037d1

Commits on May 14, 2024

• converting dataclasses to pydantic, numpy arrays fail

  prismofeverything

  committed
  b39f1d5

• Merge branch 'pydantic' of github.com:vivarium-collective/bigraph-schema into pydantic

  prismofeverything

  committed
  61c8a65