r4aou

R package for tasks inside All of Us Workbench (AllofUs or AOU)

NEW URL FOR THE PACKAGE

The package new home is https://github.com/lhncbc/CRI/tree/master/AoU/r4aou

OLD README (ARCHIVED)

Install package

library(devtools)
install_github('vojtechhuser/r4aou')

Sample use

aou_tables()

Initial code for notebook

  library(purrr);library(tidyverse);library(magrittr);library(devtools);library(stringr);library(bigrquery);library(glue)
  options(scipen=999) #disable scientific notation

  dataset = Sys.getenv('WORKSPACE_CDR')
  dataset
  cdmDatabaseSchema <- dataset

  billing=Sys.getenv('GOOGLE_PROJECT')
  billing