only run longitudinal_axis extraction if sensor location is hip #1024

wadpac · Jan 29, 2024 · e19fd46 · e19fd46
1 parent b60acb4
commit e19fd46
Showing 1 changed file with 10 additions and 8 deletions.
diff --git a/R/g.part3.R b/R/g.part3.R
@@ -75,14 +75,16 @@ g.part3 = function(metadatadir = c(), f0, f1, myfun = c(),
       load(paste(metadatadir, "/meta/basic/meta_", fnames[i], sep = ""))
       load(paste(metadatadir, "/meta/ms2.out/", fnames[i], sep = ""))
       if (M$filecorrupt == FALSE & M$filetooshort == FALSE) {
-        if (is.null(params_sleep[["longitudinal_axis"]])) {
-          # If user does not specify longitudinal axis explicitly then re-use
-          # estimated longitudinal axis from part 2
-          if (is.na(SUM$summary$if_hip_long_axis_id) == FALSE) {
-            params_sleep[["longitudinal_axis"]] = SUM$summary$if_hip_long_axis_id
-          } else {
-            # If not available default to 2
-            params_sleep[["longitudinal_axis"]] = 2
+        if (params_general[["sensor.location"]] == "hip") {
+          if (is.null(params_sleep[["longitudinal_axis"]])) {
+            # If user does not specify longitudinal axis explicitly then re-use
+            # estimated longitudinal axis from part 2
+            if (is.na(SUM$summary$if_hip_long_axis_id) == FALSE) {
+              params_sleep[["longitudinal_axis"]] = SUM$summary$if_hip_long_axis_id
+            } else {
+              # If not available default to 2
+              params_sleep[["longitudinal_axis"]] = 2
+            }
           }
         }
         SLE = g.sib.det(M, IMP, I, twd = c(-12,12),