This package is a homework about unsupervised clustering of scRNA-seq data. The package contains download scRNA-seq data from "https://www.10xgenomics.com".
In your command line, type "pip install https://github.com/warming151/Huang-bmi-hw4/raw/main/dist/Huanghw4-1.0.0-py3-none-any.whl"
python
from Huanghw4 import hw4
hw4.unsupervised_umap()
The running time is 3 minutes in Titan'x 12 GB gpu and Intel Iris 16 GB cpu.