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code, data, and analysis for new single-cell differential expression methodology

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wiscstatman/scDDboost-fullproject

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Manuscript, supplementary material, and additional codes for scDDboost, a methodology for scoring changes in the distribution of single-cell expression data.

The scDDboost R package is maintained at http://github.com/wiscstatman/scDDboost/

Due the limititation of file size, empirical data are available at:

https://drive.google.com/open?id=1RiBWxUhMfh7dduufjVBja6Rdy5V5MTPs

and

https://www.dropbox.com/sh/xosn62czbubt72o/AACyvV9mJPnRBOHylHwFgk3xa?dl=0

Codes for doing the analysis in table are presented at codes directory

To install the package:

# install.packages("devtools")
devtools::install_github("wiscstatman/scDDboost")

A brief tutorial and data examples can be found at Rpackage/vignette/scDDb.pdf.

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