MNT: update notebooks to xradar >=0.8.0 and xarray>=2024.10.0 (#95)

* MNT: update to xradar >=0.8.0 and xarray>=2024.10.0 * FIX: add packages, fix recipe4.ipynb
wradlib · Nov 6, 2024 · bd7acab · bd7acab
1 parent 547bdff
commit bd7acab
Show file tree

Hide file tree

Showing 10 changed files with 117 additions and 81 deletions.
diff --git a/ci/requirements/notebooks.yml b/ci/requirements/notebooks.yml
@@ -15,6 +15,8 @@ dependencies:
   - h5py
   - h5netcdf
   - lat_lon_parser
+  - libgdal-hdf5
+  - libgdal-netcdf
   - nbconvert
   - nc-time-axis
   - netCDF4

diff --git a/notebooks/classify/clutter_cloud.ipynb b/notebooks/classify/clutter_cloud.ipynb
@@ -39,13 +39,6 @@
     "    plt.ion()"
    ]
   },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": []
-  },
   {
    "cell_type": "markdown",
    "metadata": {},
@@ -79,10 +72,11 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "pvol = pvol.filter(lambda x: \"sweep\" in x.name)\n",
+    "pvol1 = pvol.match(\"sweep*\")\n",
+    "display(pvol1)\n",
     "vol = []\n",
-    "for sweep in pvol.values():\n",
-    "    vol.append(sweep.ds.pipe(wrl.georef.georeference))\n",
+    "for sweep in pvol1.values():\n",
+    "    vol.append(sweep.to_dataset().pipe(wrl.georef.georeference))\n",
     "vol = xr.concat(vol, dim=\"tilt\")\n",
     "vol = vol.assign_coords(sweep_mode=vol.sweep_mode)\n",
     "display(vol)"
@@ -232,18 +226,20 @@
     "\n",
     "ax = fig.add_subplot(131)\n",
     "pm = vol.DBZH[tilt].wrl.vis.plot(ax=ax)\n",
-    "plt.colorbar(pm, shrink=0.5)\n",
+    "# plt.colorbar(pm, shrink=0.5)\n",
     "plt.title(\"Radar reflectivity\")\n",
     "\n",
     "ax = fig.add_subplot(132)\n",
     "pm = vol.sat[tilt].wrl.vis.plot(ax=ax)\n",
-    "plt.colorbar(pm, shrink=0.5)\n",
+    "# plt.colorbar(pm, shrink=0.5)\n",
     "plt.title(\"Satellite cloud classification\")\n",
     "\n",
     "ax = fig.add_subplot(133)\n",
     "pm = vol.clutter[tilt].wrl.vis.plot(ax=ax)\n",
-    "plt.colorbar(pm, shrink=0.5)\n",
-    "plt.title(\"Detected clutter\")"
+    "# plt.colorbar(pm, shrink=0.5)\n",
+    "plt.title(\"Detected clutter\")\n",
+    "\n",
+    "fig.tight_layout()"
    ]
   }
  ],
@@ -258,7 +254,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.0"
+   "version": "3.12.4"
   },
   "toc": {
    "colors": {

diff --git a/notebooks/fileio/backends/cfradial1_backend.ipynb b/notebooks/fileio/backends/cfradial1_backend.ipynb
@@ -36,7 +36,6 @@
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",
     "import xradar as xd\n",
-    "import datatree as xt\n",
     "import xarray as xr\n",
     "\n",
     "try:\n",
@@ -225,7 +224,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.0"
+   "version": "3.12.4"
   }
  },
  "nbformat": 4,

diff --git a/notebooks/fileio/backends/cfradial2_backend.ipynb b/notebooks/fileio/backends/cfradial2_backend.ipynb
@@ -34,7 +34,6 @@
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",
     "import xradar as xd\n",
-    "import datatree as xt\n",
     "import xarray as xr\n",
     "\n",
     "try:\n",
@@ -58,7 +57,7 @@
    "source": [
     "fpath = \"netcdf/cfrad.20080604_002217_000_SPOL_v36_SUR_cfradial2.nc\"\n",
     "f = wrl.util.get_wradlib_data_file(fpath)\n",
-    "vol = xt.open_datatree(f)"
+    "vol = xr.open_datatree(f)"
    ]
   },
   {
@@ -207,7 +206,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.0"
+   "version": "3.12.4"
   }
  },
  "nbformat": 4,

diff --git a/notebooks/fileio/backends/furuno_backend.ipynb b/notebooks/fileio/backends/furuno_backend.ipynb
@@ -37,7 +37,6 @@
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",
     "import xradar as xd\n",
-    "import datatree as xt\n",
     "import xarray as xr\n",
     "\n",
     "try:\n",
@@ -367,7 +366,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.0"
+   "version": "3.12.4"
   }
  },
  "nbformat": 4,

diff --git a/notebooks/fileio/backends/gamic_backend.ipynb b/notebooks/fileio/backends/gamic_backend.ipynb
@@ -35,7 +35,6 @@
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",
     "import xradar as xd\n",
-    "import datatree as xt\n",
     "import xarray as xr\n",
     "\n",
     "try:\n",
@@ -220,7 +219,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.0"
+   "version": "3.12.4"
   }
  },
  "nbformat": 4,

diff --git a/notebooks/fileio/backends/iris_backend.ipynb b/notebooks/fileio/backends/iris_backend.ipynb
@@ -37,7 +37,6 @@
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",
     "import xradar as xd\n",
-    "import datatree as xt\n",
     "import xarray as xr\n",
     "\n",
     "try:\n",
@@ -213,7 +212,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.0"
+   "version": "3.12.4"
   }
  },
  "nbformat": 4,

diff --git a/notebooks/fileio/backends/odim_backend.ipynb b/notebooks/fileio/backends/odim_backend.ipynb
@@ -36,7 +36,6 @@
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",
     "import xradar as xd\n",
-    "import datatree as xt\n",
     "import xarray as xr\n",
     "\n",
     "try:\n",
@@ -220,13 +219,6 @@
     ")\n",
     "display(ts)"
    ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": []
   }
  ],
  "metadata": {
@@ -240,7 +232,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.0"
+   "version": "3.12.4"
   }
  },
  "nbformat": 4,

diff --git a/notebooks/fileio/backends/rainbow_backend.ipynb b/notebooks/fileio/backends/rainbow_backend.ipynb
@@ -37,7 +37,6 @@
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",
     "import xradar as xd\n",
-    "import datatree as xt\n",
     "import xarray as xr\n",
     "\n",
     "try:\n",
@@ -213,7 +212,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.0"
+   "version": "3.12.4"
   }
  },
  "nbformat": 4,