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Shiny App to collect responses for XChem Experiments

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XChemReview

DOI

A shiny app to collect the responses from XChemExperiments

Setup

Requirements

  • Podman/Docker (The scripts int this are setup to use podman but you can replace podman with docker)
  • Access to a database containing various information about xchem experiments.
  • In this example a kubernetes cluster...

Installation

If rebuilding the image configure the kube.yaml, Dockerfile and rebuild_image.sh correctly, specifying the repository you want to store you image into. Then run rebuild_image.sh to clean up images, rebuild and then redeploy.

If you have made changes to the tjgorrie/nglshiny or app.R run restart_pod.sh to restart the kubernetes pod.

Running

While connected to the VPN you should be able to access xchemreview.diamond.ac.uk and use the website.

Using staging

Click on buttons to make things happen, it shouldn't crash! If it does, email me..

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Shiny App to collect responses for XChem Experiments

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