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christmass pre-release (#394)
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* Update build-main.yaml

got rid of scheduled rebuild because it's messing up data

* updated react16 to react 18.2, replaced hot-loaders modules by react-refresh, removed react-undo module

* added proper values for Typography variant

* renamed obsolete create theme function

* #1063 added header and search

* #1063 fixed body table, page count and search

* #1063 fixed minor bugs and set clear filter

* Squashed commit of the following:

commit 10925d2
Author: RobertMatuska <[email protected]>
Date:   Thu Sep 28 10:27:36 2023 +0200

    #1114 edited text and style

* #1161 setted search and filter for old target list

* #1161 fixed discourse icon padding

* #1161 fixed filtered list sort

* #1161 fixed target access sort and filter

* #1161 fixed change page

* #1145 preserve state of molecule rendering, save also actions of representation changes to snapshot

* do not wrap display controls buttons

* #1167 resize target list colmuns

* #1161 fixed sorting

* #1161 fixed sorting

* #1161 edit sort functionality for filter table

* #1161 fixed search, filter, sort by target access

* #1161 created init date column

* #1161 # filtering and sorting init date

* #1161 fixed clear and sort init date

* #1161 fixed target sorting

* Squashed commit of the following:

commit d489526
Merge: 1c45038 411921f
Author: Boris Kovar <[email protected]>
Date:   Mon Oct 16 08:24:05 2023 +0200

    Merge branch '#1173' of https://github.com/m2ms/fragalysis-frontend into #1173

commit 1c45038
Author: Boris Kovar <[email protected]>
Date:   Fri Oct 13 11:03:49 2023 +0200

    - implemented #1173 also with save/restore and undo/redo functionality

commit 411921f
Author: Boris Kovar <[email protected]>
Date:   Fri Oct 13 11:03:49 2023 +0200

    - implemented #1173 also with save/restore and undo/redo functionality

* merge

* Squashed commit of the following:

commit 7883c15
Merge: 5e2b937 19b9f24
Author: Boris Kovar <[email protected]>
Date:   Mon Oct 16 11:19:36 2023 +0200

    Merge branch '#1172' of https://github.com/m2ms/fragalysis-frontend into #1172

commit 5e2b937
Author: Boris Kovar <[email protected]>
Date:   Mon Oct 16 11:16:15 2023 +0200

    - added compound_set to csv export - #1172

commit 19b9f24
Author: Boris Kovar <[email protected]>
Date:   Mon Oct 16 11:16:15 2023 +0200

    - added compound_set to csv export - #1172

commit 75ac125
Merge: f50666c 574c7b5
Author: Boris Kovar <[email protected]>
Date:   Mon Oct 16 08:26:08 2023 +0200

    Merge branch '#1172' of https://github.com/m2ms/fragalysis-frontend into #1172

commit f50666c
Author: Boris Kovar <[email protected]>
Date:   Fri Oct 13 13:45:34 2023 +0200

    - implemented #1172

commit 574c7b5
Author: Boris Kovar <[email protected]>
Date:   Fri Oct 13 13:45:34 2023 +0200

    - implemented #1172

* #1167 fixed issues

* #1167 reworked resizer

* #1161 fixed merge bugs

* #1161 removed console

* updated react16 to react 18.2, replaced hot-loaders modules by react-refresh, removed react-undo module

* added proper values for Typography variant

* renamed obsolete create theme function

* changed deprecated justify= to justifyContent=

* fixed some landing page errors, mostly missing key and using useState outside of useEffect in functional component

* #1061 loading and toast functionality move from header context into LoadingContext and ToastContext, added loading indicator for tags and hits panes + hit/molecule control buttons

* #1171 return representations when loading protein without quality to show it in display control

* do not set logged in toast message if user is not logged in

* fixed Tooltip error messages about its disabled child, fixed invalid variant type and removed xs from Grid container (it is Grid item property)

* fixed null value for open property

* fixed "ButtonGroup component doesn't accept a Fragment as a child. Consider providing an array instead"

* fixed "<div> cannot appear as a descendant of <p>" error by adding "component={'div'}" property to complex Typography component

* removed invalid way of setting color for tag, it does not work - only throws error and with proper setting it is same as background color..

* fixed missing key error

* fixed invalid references erros

* fixed unknown properties error and missing key

* - #1139 - updated docker-compose file to be ready for new backend version

* - initial implementation of #1139 - tags and molecules

* - #1139 - tags, molecules updated to use new api - not final version

* - changed configuration

* - #1139 - updated docker-compose file to be ready for new backend version

* - initial implementation of #1139 - tags and molecules

* - #1139 - tags, molecules updated to use new api - not final version

* - fixed search bar placeholder for hits

* - #1139 - updated docker-compose file to be ready for new backend version

* - initial implementation of #1139 - tags and molecules

* - #1139 - tags, molecules updated to use new api - not final version

* - initial implementation of #1139 - tags and molecules

* - #1139 - tags, molecules updated to use new api - not final version

* - #1139 - fixed snapshot creation and restoration

* #1167 target and project list resizer

* #1167 fixed project list width

* #1161 changed width

* - #1183 - dynamic handling of tag categories

* - fixed #1186

* - job file transfer backend

* - checkpoint

* - new CI/CD

* Update build-main.yaml

got rid of scheduled rebuild because it's messing up data

* updated react16 to react 18.2, replaced hot-loaders modules by react-refresh, removed react-undo module

* added proper values for Typography variant

* renamed obsolete create theme function

* changed deprecated justify= to justifyContent=

* fixed some landing page errors, mostly missing key and using useState outside of useEffect in functional component

* rebase

* #1171 return representations when loading protein without quality to show it in display control

* do not set logged in toast message if user is not logged in

* fixed Tooltip error messages about its disabled child, fixed invalid variant type and removed xs from Grid container (it is Grid item property)

* fixed null value for open property

* fixed "ButtonGroup component doesn't accept a Fragment as a child. Consider providing an array instead"

* fixed "<div> cannot appear as a descendant of <p>" error by adding "component={'div'}" property to complex Typography component

* removed invalid way of setting color for tag, it does not work - only throws error and with proper setting it is same as background color..

* fixed missing key error

* fixed invalid references erros

* fixed unknown properties error and missing key

* - #1139 - updated docker-compose file to be ready for new backend version

* - initial implementation of #1139 - tags and molecules

* - #1139 - tags, molecules updated to use new api - not final version

* - changed configuration

* - #1139 - updated docker-compose file to be ready for new backend version

* - initial implementation of #1139 - tags and molecules

* - #1139 - tags, molecules updated to use new api - not final version

* - fixed search bar placeholder for hits

* - #1139 - updated docker-compose file to be ready for new backend version

* - initial implementation of #1139 - tags and molecules

* - #1139 - tags, molecules updated to use new api - not final version

* - initial implementation of #1139 - tags and molecules

* - #1139 - tags, molecules updated to use new api - not final version

* - #1139 - fixed snapshot creation and restoration

* - #1183 - dynamic handling of tag categories

* - job file transfer backend

* - checkpoint

* - new CI/CD

* - fixed build errors

* Squashed commit of the following:

commit d5c9709
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 16 07:36:56 2023 +0100

    - fixes blank page

* #1035 added front-end pert of status lights for services

* #1035 added API endpoint and changed refresh rate to 30 seconds for now

* #1035 do not end up on failed response

* Squashed commit of the following:

commit e1dd8bd
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 21 09:16:46 2023 +0100

    - #1211 fixed and also fixed other problems which were hiding problems with snapshot restoration

* Squashed commit of the following:

commit e79b49f
Author: Boris Kovar <[email protected]>
Date:   Thu Dec 7 09:44:55 2023 +0100

    - fixed RHS for #1239

* #1217 save all actions to action list for snapshot not only the first ones, fixed of possible crash, adjusted restoring representations from snapshot

* - updated docker-compose

* Squashed commit of the following:

commit 50d574d
Merge: 1fdebff 3b4e7a7
Author: Boris Kovar <[email protected]>
Date:   Wed Dec 13 09:06:19 2023 +0100

    Merge branch '#1190' of https://github.com/m2ms/fragalysis-frontend into #1190

commit 1fdebff
Author: Boris Kovar <[email protected]>
Date:   Wed Dec 13 08:14:58 2023 +0100

    - RC of #1190

commit dabee45
Author: Boris Kovar <[email protected]>
Date:   Tue Dec 5 09:20:02 2023 +0100

    - checkpoint

commit 4e9a674
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 16 13:17:05 2023 +0100

    - using new backend image

commit c90fc47
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 16:13:26 2023 +0100

    - L, P, C, S, V buttons work now

commit 515cb8b
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit ab0a297
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 216762b
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 6f628a7
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 823bf2c
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 16:13:26 2023 +0100

    - L, P, C, S, V buttons work now

commit a7aa657
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 101751b
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 5a6935a
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 1d01387
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit b3c7813
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 16 13:17:05 2023 +0100

    - using new backend image

commit f48dc9d
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 16:13:26 2023 +0100

    - L, P, C, S, V buttons work now

commit 813b553
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit b49f773
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 98f566b
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit a01f097
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit a6d8930
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 14 16:42:23 2023 +0100

    - #1190 - implemented tags

commit 392938b
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 16:13:26 2023 +0100

    - L, P, C, S, V buttons work now

commit 69ab4c2
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit e6b700b
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit a7e6aad
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 4fc93c0
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 12:03:11 2023 +0100

    - checkpoint

commit 58573f6
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit ecc3d6c
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 2 07:59:19 2023 +0100

    - #1190 - compounds for LHS

commit 3b4e7a7
Author: Boris Kovar <[email protected]>
Date:   Wed Dec 13 08:14:58 2023 +0100

    - RC of #1190

commit 1debb80
Author: Boris Kovar <[email protected]>
Date:   Tue Dec 5 09:20:02 2023 +0100

    - checkpoint

commit 4f714be
Merge: 730d9e5 bcc1568
Author: Boris Kovar <[email protected]>
Date:   Wed Nov 22 07:41:51 2023 +0100

    Merge branch '#1190' of https://github.com/m2ms/fragalysis-frontend into #1190

    # Conflicts:
    #	js/reducers/api/apiReducers.js
    #	js/reducers/api/constants.js

commit 730d9e5
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 16 13:17:05 2023 +0100

    - using new backend image

commit 76ea646
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 16:13:26 2023 +0100

    - L, P, C, S, V buttons work now

commit 67439de
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit a38e0a3
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 64b67c5
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 35b2777
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 8104514
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 14 16:42:23 2023 +0100

    - #1190 - implemented tags

commit 5432a99
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 16:13:26 2023 +0100

    - L, P, C, S, V buttons work now

commit f5ea66f
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit d3fb020
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 84d4889
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 2979630
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 12:03:11 2023 +0100

    - checkpoint

commit 7241df5
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 195e30e
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 2 07:59:19 2023 +0100

    - #1190 - compounds for LHS

commit bcc1568
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 16 13:17:05 2023 +0100

    - using new backend image

commit 60136ed
Merge: 85c06a9 a18f80f
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 16 08:01:49 2023 +0100

    Merge branch '#1190' of https://github.com/m2ms/fragalysis-frontend into #1190

commit 85c06a9
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 14 16:42:23 2023 +0100

    - #1190 - implemented tags

commit 6dd0268
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 16:13:26 2023 +0100

    - L, P, C, S, V buttons work now

commit 0854241
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 1686e02
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit ffba65b
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 1f22288
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 12:03:11 2023 +0100

    - checkpoint

commit e5a04e5
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 155a96b
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 2 07:59:19 2023 +0100

    - #1190 - compounds for LHS

commit a18f80f
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 14 16:42:23 2023 +0100

    - #1190 - implemented tags

commit 43b7476
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 16:13:26 2023 +0100

    - L, P, C, S, V buttons work now

commit 1f9eba8
Merge: 17b9cb1 3d51ab0
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:52:19 2023 +0100

    Merge branch '#1190' of https://github.com/m2ms/fragalysis-frontend into #1190

commit 17b9cb1
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit 63122eb
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 12:03:11 2023 +0100

    - checkpoint

commit 362ec04
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 26d2f31
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 2 07:59:19 2023 +0100

    - #1190 - compounds for LHS

commit 3d51ab0
Author: Boris Kovar <[email protected]>
Date:   Mon Nov 13 08:28:59 2023 +0100

    - checkpoint

commit e3138f7
Merge: 3beca8c c95b841
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 9 13:47:44 2023 +0100

    Merge branch '#1190' of https://github.com/m2ms/fragalysis-frontend into #1190

commit 3beca8c
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 12:03:11 2023 +0100

    - checkpoint

commit 2d8e3c4
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit fa13fe9
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 2 07:59:19 2023 +0100

    - #1190 - compounds for LHS

commit c95b841
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 12:03:11 2023 +0100

    - checkpoint

commit 74fb512
Author: Boris Kovar <[email protected]>
Date:   Tue Nov 7 06:42:52 2023 +0100

    - checkpoint

commit 2833754
Author: Boris Kovar <[email protected]>
Date:   Thu Nov 2 07:59:19 2023 +0100

    - #1190 - compounds for LHS

* - fix for tags

* - fixed issue with checkboxes for #1190

* #1181 fixed min width and maximum width design

* #1181 created compound sets table

* #1181 fixed layout with Compound sets

* #1181 changed functionality for radio buttons

* #1181 RHS UI improvements, fixed some related error

* #1203 download compound molecules as csv export, populate compound summary table from common scores

* #1181 changed active filter icon from different colour to red dot indicator

* #1202 added rationale and ref_url info into inspiration dialog

* #1204 search compound sets by title

* #1181 added tooltips for all columns

* #1202 updated visual of summary

* #1181 adjusted columns widths, show number of compounds in set in # column

* #1181 adjusted RHS height and increased maximum width

* #1121 renamed references of unique_name to name since it was removed

* Squashed commit of the following:

commit a8e1fda
Merge: e97995d 7f619a7
Author: Boris Kovar <[email protected]>
Date:   Wed Dec 20 10:21:56 2023 +0100

    Merge branch '#1077' of https://github.com/m2ms/fragalysis-frontend into #1077

commit e97995d
Author: Boris Kovar <[email protected]>
Date:   Wed Dec 20 07:48:27 2023 +0100

    - small fix for #1077

commit 8ee8cb1
Author: Boris Kovar <[email protected]>
Date:   Tue Dec 19 10:54:25 2023 +0100

    - fixed problem with UI showing error that target from URL is not recognized when the targets are not yet loaded

commit 32018c9
Author: Boris Kovar <[email protected]>
Date:   Tue Dec 19 10:27:28 2023 +0100

    - checking out the sorting of target list

commit da3abeb
Author: Boris Kovar <[email protected]>
Date:   Mon Dec 18 14:22:03 2023 +0100

    - #1195

commit f593a1e
Author: Boris Kovar <[email protected]>
Date:   Mon Dec 18 12:41:31 2023 +0100

    - #1166

commit 96733ed
Author: Boris Kovar <[email protected]>
Date:   Mon Dec 18 09:02:49 2023 +0100

    - implemented #1077

commit 7f619a7
Author: Boris Kovar <[email protected]>
Date:   Wed Dec 20 07:48:27 2023 +0100

    - small fix for #1077

commit c29b995
Author: Boris Kovar <[email protected]>
Date:   Tue Dec 19 10:54:25 2023 +0100

    - fixed problem with UI showing error that target from URL is not recognized when the targets are not yet loaded

commit a70d4a2
Author: Boris Kovar <[email protected]>
Date:   Tue Dec 19 10:27:28 2023 +0100

    - checking out the sorting of target list

commit 5f1ea56
Author: Boris Kovar <[email protected]>
Date:   Mon Dec 18 14:22:03 2023 +0100

    - #1195

commit 7c5c6b5
Author: Boris Kovar <[email protected]>
Date:   Mon Dec 18 12:41:31 2023 +0100

    - #1166

commit d51914e
Author: Boris Kovar <[email protected]>
Date:   Mon Dec 18 09:02:49 2023 +0100

    - implemented #1077

---------

Co-authored-by: matej <[email protected]>
Co-authored-by: RobertMatuska <[email protected]>
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