Fix documentation

xrobin · Jul 28, 2024 · 8517c59 · 8517c59
1 parent 9d32e59
commit 8517c59
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Showing 3 changed files with 5 additions and 5 deletions.
diff --git a/R/plot.ci.R b/R/plot.ci.R
@@ -71,7 +71,7 @@ plot.ci.se <- function(x, type=c("bars", "shape"), length=.01*ifelse(attr(x, "ro
   invisible(x)
 }
 
-plot.ci.coords <- function(x, type=c("bars", "shape"), input=NULL, length=NULL, col=ifelse(type=="bars", par("fg"), "gainsboro"), ...) {
+plot.ci.coords <- function(x, type=c("bars", "shape"), length=NULL, col=ifelse(type=="bars", par("fg"), "gainsboro"), ...) {
 	type <- match.arg(type)
 	if (length(x) > 1) {
 		warning(sprintf("'ci.coords' object contains multiple coordinates, only %s will be plotted", names(x)[1]))

diff --git a/man/ci.coords.Rd b/man/ci.coords.Rd
@@ -18,7 +18,7 @@
 \usage{
 # ci.coords(...)
 \S3method{ci.coords}{roc}(roc, x,
-input=c("threshold", "specificity", "sensitivity"),
+input="threshold",
 ret=c("threshold", "specificity", "sensitivity"),
 best.method=c("youden", "closest.topleft"), best.weights=c(1, 0.5),
 best.policy = c("stop", "omit", "random"),

diff --git a/man/plot.ci.Rd b/man/plot.ci.Rd
@@ -4,6 +4,7 @@
 \alias{plot.ci.thresholds}
 \alias{plot.ci.se}
 \alias{plot.ci.sp}
+\alias{plot.ci.coords}
 
 \title{
   Plot confidence intervals
@@ -21,9 +22,8 @@
 \S3method{plot}{ci.se}(x, type=c("bars", "shape"), length=.01*ifelse(attr(x,
 "roc")$percent, 100, 1), col=ifelse(type=="bars", par("fg"),
 "gainsboro"), no.roc=FALSE, ...)
-\S3method{plot}{ci.coords}(x, type=c("bars", "shape"), length=.01*ifelse(attr(x,
-"roc")$percent, 100, 1), col=ifelse(type=="bars", par("fg"),
-"gainsboro"), no.roc=FALSE, ...)
+\S3method{plot}{ci.coords}(x, type=c("bars", "shape"), length=NULL,
+col=ifelse(type=="bars", par("fg"), "gainsboro"), ...)
 }
 
 \arguments{