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Transform #2

Merged
merged 119 commits into from
Aug 1, 2024
Merged

Transform #2

merged 119 commits into from
Aug 1, 2024

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xuyuon
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@xuyuon xuyuon commented Aug 1, 2024

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thomasckng and others added 30 commits July 23, 2024 13:55
@thomasckng
Update Single_event_runManager.py
77e0247
@kazewong
Merge pull request kazewong#105 from kazewong/main
86da005 
Sync jim dev
@thomasckng
Merge branch 'kazewong:jim-dev' into jim-dev
540b4db
@kazewong
Merge pull request kazewong#102 from thomasckng/jim-dev
8e6d789 
Removed Unused Variable in RunManager Example
@kazewong
scaffolding jim to handle naming.
75c74a3 
Also isort some import in prior.py
@kazewong
Rename variables in jim
c749dbd
@kazewong
Starting tracking names in jim
f45b41e
@kazewong
Add Transform class
dd6e0de
@kazewong
Add LogitToUniform Transform
f11f8c8
@kazewong
Add logit distribution
c1192f2
@kazewong
Add propagate)name method in transform
b3ebc5e
@kazewong
Rename composite to Combine for combining priors
95ef89b
@kazewong
scaffold prior test
e6e45ef
@kazewong
Add Sequential Transform
d503a37
@kazewong
Separate logit and scaling.
61b3b9e 
Also rename prior
@kazewong
Univeriate Transform seems working
b47e6ae
@kazewong
Uniform prior now working.
e1cc408 
Also add prior test
@kazewong
Added inverse transform and uniform now perform correct
d68cb36
@kazewong
Add comments to current sequential transform prior class
c16eef5
@kazewong
Removing inverse.
8ab92a4 
Inverse limts the type of transform one can use,
And it doesn't seem to have case that will require log_prob on target space
@kazewong
Add transformation function
d8b2d1f
@kazewong
Combine should be working now
ca1d6b6
@kazewong
Sine is an illegal transform since its Jacobian could be negative
2f3f412
@thomasckng
Modify Uniform and add UniformSphere
4978cb1
@thomasckng
Add Sine and Cosine Prior
c1115bd
@thomasckng
Revert "Modify Uniform and add UniformSphere"
01a6c1e 
This reverts commit 4978cb1.
@thomasckng
Add standard normal distribution
7ee4133
@thomasckng
Add periodic uniform prior
6a35792
@thomasckng
Reformat
1bcf32c
@thomasckng
Merge branch '98-moving-naming-tracking-into-jim-class-from-prior-cla…
17450be 
…ss' into sphere_prior
kazewong and others added 29 commits July 31, 2024 12:26
@kazewong
prior system should work with dictionary function now
0252392
@kazewong
update transform
cb75bb9
@thomasckng
Merge branch '98-moving-naming-tracking-into-jim-class-from-prior-cla…
fd32f20 
…ss' into transform
@kazewong
Move subclassing structure
561e628
@thomasckng
Remove transformation
1aaf5ea
@thomasckng
Remove prior
5bfdda1
@thomasckng
Merge branch '98-moving-naming-tracking-into-jim-class-from-prior-cla…
77a6ad1 
…ss' into transform
@thomasckng
Add mass transform
2401df8
@thomasckng
Merge branch '98-moving-naming-tracking-into-jim-class-from-prior-cla…
f932c77 
…ss' into transform
@kazewong
Add Bound transforming transform
ff35a82
@kazewong
no nans now, but the code can be consolidate
47af9cf
@thomasckng
Solve conflict
b5e06a6
@thomasckng
Merge branch '98-moving-naming-tracking-into-jim-class-from-prior-cla…
b7d08d3 
…ss' into transform
@thomasckng
Add sky position transform
8e5b326
@thomasckng
Modify sky position transform
10d51b2
@thomasckng
Change util func name
8368d00
@thomasckng
Merge branch '98-moving-naming-tracking-into-jim-class-from-prior-cla…
b4f6052 
…ss' into transform
@thomasckng
Revert "Merge branch '98-moving-naming-tracking-into-jim-class-from-p…
1cb0d11 
…rior-class' into transform"

This reverts commit b4f6052, reversing
changes made to 8368d00.
@thomasckng
Merge
78e93c5
@thomasckng
Modify integration test
080bd8b
@thomasckng
Reformat
4058d32
@thomasckng
Add typecheck
cdf771d
@thomasckng
minor typo
02c5650
@thomasckng
Rename sampler
ce7ac34
@thomasckng
Fix test
7d44aa4
@thomasckng
Fix BoundToUnbound transform
e9288c8
@thomasckng
Use ifos list
fe500a7
@thomasckng
Fix jim summary and get_samples
0d28520
@thomasckng
Fix jim output functions
f7e3fe8
@xuyuon xuyuon merged commit f89bf6f into xuyuon:add-pv2 Aug 1, 2024
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3 participants
@xuyuon @thomasckng @kazewong