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Scripts I wrote to help automatically install nuclear physics and related software that I use for research

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yardasol/ubuntu-nuclear-software-installer

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ubuntu-nuclear-software-installer

This repository contains some scripts I wrote to install software I use and contribute to in my research. The scripts also sets up local git repositories and links them to user forks (ORIGIN) and the project host repositories (UPSTREAM).

This set of scripts installs, builds, and tests (if possible) various nuclear reactor physics and related software. The scripts install the following:

  • OpenMC

  • PyNE

  • SaltProc

  • CPython

    builds python with debugging symbols turned on as a conda package. This is useful for using interactive debuggers (e.g. gdb) on software like PyNE that use both C and Python)

  • Serpent2

    note: since serpent is export-controlled software, you'll need to obtain the source code on your own. All information used to modify install flags and apply bug fixes can be found on the installation page in the Serpent wiki and the Serpent forums respectively. See serpent/bugfixes/ for an itemized list of each bug.

Requirements

  • The user must have a fork of the desired software tool(s) (if a public repository exists) for the scripts to run successfully.
  • The user must have conda installed for software that uses python. Currently, the software only works if with anaconda. The anaconda3 folder must be located in home. I recommend using Sam Dotson's script ubuntu-post-installer to do this, as well as set up a few other useful pieces of software on ubuntu)

Installation

Assuming you have set up ssh keys, run the following in your terminal

git clone [email protected]:yardasol/ubuntu-nuclear-software-installer

Boom. You're done

Usage

The following variables should be set by the end user:

  • GITHUB_UNAME in install.bash

To use the software, run the following in your terminal

cd ubuntu-nuclear-software-installer
bash ubuntu-nuclear-software-installer.bash CODENAME

If something went wrong and you want to try again, add the --clean flag:

bash ubuntu-nuclear-software-installer.bash CODENAME --clean

Boom. You're done.

Contributing

Please read CONTRIBUTING.md before making any changes

Credits

The ubuntu-post-installer and awesome-nuclear repositories inspired this project. The following wikis, forums, and docs were invaluable resources in writing these scripts:

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