Antibody Sequence Similarity Checker

This project provides a simple tool to compare antibody sequences and find similarities between them.

Requirements

• Python 3
• Biopython library (pip install biopython)

Files

• antibody_similarity_checker.py: The main Python script for loading antibody sequences from a FASTA file and finding similar sequences.
• README.md: Instructions for running the project.

Usage

1. Place your antibody sequences in a FASTA file named antibodies.fasta.
2. Run the script:

   python antibody_similarity_checker.py
   

3. The script will print sequences with a similarity ratio above the given threshold (default is 0.85).

Example

To run the script:

python antibody_similarity_checker.py

Ensure you have your antibodies.fasta file in the same directory.