VBSKY: Variational Bayesian phylodynamic inference

This package implements the method VBSKY, as described in the paper:

Variational phylodynamic inference using pandemic-scale data
Caleb Ki, Jonathan Terhorst.
bioRxiv 2022.02.10.479891; doi: https://doi.org/10.1101/2022.02.10.479891

An example notebook showing how to use this software is available here. Notebooks which reproduce the analysis in the paper can be found in the paper folder.