Pinned Loading

1. ggmolvis ggmolvis Public

   Python 6

2. ENPMDA ENPMDA Public

   Parallel analysis for ensemble simulation

   Python 5

3. MDAnalysis/mdanalysis MDAnalysis/mdanalysis Public

   MDAnalysis is a Python library to analyze molecular dynamics simulations.

   Python 1.3k 652

4. BradyAJohnston/MolecularNodes BradyAJohnston/MolecularNodes Public

   Toolbox for molecular animations in Blender, powered by Geometry Nodes.

   Python 918 86

5. deeptime-ml/deeptime deeptime-ml/deeptime Public

   Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation

   Python 767 84

6. markovmodel/PyEMMA markovmodel/PyEMMA Public archive

   🚂 Python API for Emma's Markov Model Algorithms 🚂

   Python 310 119