SIGNAL is a R package for data integration by learning group technical variations. If you have any suggestions or problems on this package, please contact Y. Zhou ([email protected]), or submit through this GitHub page directly.
To run SIGNAL, install from GitHub through devtools directly:
install.packages('devtools')
library(devtools)
devtools::install_github("yzhou1999/SIGNAL")For usage examples, please see the vignettes directory of the repository.
- Supervised integration using SIGNAL
- Multi-scale analysis using SIGNAL
- Knowledge transfer from reference to query using SIGNAL
SIGNAL has been successfully installed and used on Windows, Linux and Mac OS (R version >= 4.0.2). The dependencies including: base, stats, Matrix, matrixStats, sparseMatrixStats, mclust, Rcpp, RcppEigen, irlba, BiocNeighbors, bigstatsr, dplyr, RSpectra.