Open source Invivo case file viewer.
Companion article: https://holland.vg/post/digital-cbct-scans
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Displays Invivo case files.
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Generates point clouds in Stanford PLY format.
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Dumps image data to 16-bit binary grayscale.
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Loads custom image sequences.
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Capable of creating new Invivo case files.
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Multi-threaded performance.
args: invivo-cbct --options invivo.inv
the input file is always the last argument;
optional arguments (these are the --options):
--threads
* enables multithreading (if available)
--viewer width,height
* opens viewer window after loading data
* width,height are window dimensions
* e.g. --viewer 700,700
--binary W,H
* indicates input file is binary data
previously exported using the --dump option
* e.g. --binary 536,536
--series start,end
* indicates input path is an image series,
expecting C style formatting e.g. tmp/%04d.png
* loads images numbered [start,end], inclusive
* reverse image order by reversing start/end e.g. 256,1
* e.g. --series 1,256
--invivo out.inv Last,First,DOB
* writes Invivo .inv file
(supports converting binary data back to inv)
* DOB (DateOfBirth) is expected to be in YYYYMMDD format
--dump out.bin
* specifies output binary file to create;
* the file will contain a series of raw images
stored in 16-bit unsigned little-endian format
--points out.ply min,max,palette,density
* specifies output point cloud file to create;
* the file will be a Stanford .ply containing a series
of vertices in xyzrgba format
* writes only points w/ shades in value range [min,max];
min/max are expected to be in the range [0,255]
* palette is the name of a palette from the viewer options,
but without spaces (e.g. Jet or GreenFireBlue);
('None' indicates no palette (aka gray));
* density is expected to be in range 0.0 < n <= 1.0,
but if no value is specified, density is adaptive,
where brighter pixel clusters are assumed to be denser
(XXX adaptive density is experimental; don't use it)
* e.g. --points out.ply 20,255,None,0.25
It is recommended that you install pthreads before installing (or building) JasPer.
MXE includes all the libraries you need to compile for Windows with minimal setup involved. It must be run from within a Unix environment.