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Fix CI tests #42

Merged
merged 1 commit into from
Mar 20, 2024
Merged

Fix CI tests #42

merged 1 commit into from
Mar 20, 2024

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mjohnson541
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Avoid use of liblapack 21_openblas build. This build on osx64 and linux64 causes this below error in Sella during the HFSP optimizations:

Traceback (most recent call last):
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/fireworks/core/rocket.py", line 261, in run
    m_action = t.run_task(my_spec)
  File "/Users/mjohns9/code/pynta/pynta/tasks.py", line 598, in run_task
    outputs = list(map(map_harmonically_forced_xtb,inputs))
  File "/Users/mjohns9/code/pynta/pynta/tasks.py", line 909, in map_harmonically_forced_xtb
    sp,Eharm,Fharm = run_harmonically_forced_xtb(tsstruct,atom_bond_potentials,site_bond_potentials,nslab,
  File "/Users/mjohns9/code/pynta/pynta/calculator.py", line 135, in run_harmonically_forced_xtb
    opt.run(fmax=0.02,steps=150)
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/ase/optimize/optimize.py", line 269, in run
    return Dynamics.run(self)
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/ase/optimize/optimize.py", line 156, in run
    for converged in Dynamics.irun(self):
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/ase/optimize/optimize.py", line 135, in irun
    self.step()
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/sella/optimize/optimize.py", line 235, in step
    rho = self.pes.kick(s, ev, **self.diagkwargs)
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/sella/peswrapper.py", line 327, in kick
    self._update_H(dx_final, dg_actual)
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/sella/peswrapper.py", line 220, in _update_H
    self.H.update(dx, dg)
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/sella/linalg.py", line 179, in update
    B[:self.ncart, :self.ncart] = update_H(
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/sella/hessian_update.py", line 51, in update_H
    thetas, _ = eigh(S.T @ Ytilde)
  File "/Users/mjohns9/mambaforge/envs/pynta_env/lib/python3.8/site-packages/scipy/linalg/_decomp.py", line 561, in eigh
    w, v, *other_args, info = drv(a=a1, **drv_args, **lwork_args)
_flapack.error: (liwork>=max(1,10*n)||liwork==-1) failed for 10th keyword liwork: dsyevr:liwork=1

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codecov-commenter commented Mar 20, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 50.95%. Comparing base (59c0e6a) to head (c71ecaf).
Report is 4 commits behind head on master.

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Additional details and impacted files
@@            Coverage Diff             @@
##           master      #42      +/-   ##
==========================================
- Coverage   50.95%   50.95%   -0.01%     
==========================================
  Files          12       12              
  Lines        3038     3048      +10     
==========================================
+ Hits         1548     1553       +5     
- Misses       1490     1495       +5     

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@mjohnson541 mjohnson541 merged commit 9d4d0b9 into master Mar 20, 2024
2 checks passed
@mjohnson541 mjohnson541 deleted the fix_build branch March 20, 2024 23:49
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2 participants