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fix _gather_elements in User class to only return visible elements (#… #4403

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Run time

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Job	Run time
test (3.8)	23m 13s
code-check	36s
test (3.9)	23m 2s
test (3.10)	23m 13s
test (3.11)	22m 30s
test (3.12)	22m 34s
test (3.13)	22m 52s
slack	31s
	2h 18m 31s