GitHub - zek12/Regenotype_NGS: NGS pipeline developed with Snakemake for re-calling variants from BAM files using GATK 4.1.0.0 and weCall.

zek12 / Regenotype_NGS Public

NGS pipeline developed with Snakemake for re-calling variants from BAM files using GATK 4.1.0.0 and weCall.

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Name		Name	Last commit message	Last commit date
Latest commit History 23 Commits
gatk_VQSR.snake		gatk_VQSR.snake
gatk_gvcfs.snake		gatk_gvcfs.snake
gatk_joint_genotyping.snake		gatk_joint_genotyping.snake
part1.snake		part1.snake
wecall_gvcfs.snake		wecall_gvcfs.snake
wecall_joint_genotyping.snake		wecall_joint_genotyping.snake