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  1. unfasta unfasta Public

    Command-line pipes and filters for genomic sequence data

    Shell 1

  2. taxo taxo Public

    Command line NCBI taxonomy browser

    Shell 1

  3. gene-paths gene-paths Public

    Determine gene order and orientation in assemblies

    C++

  4. cge-bap cge-bap Public

    CGE Bacterial Analysis Pipeline

    Python 2

  5. hAMRonization hAMRonization Public

    Forked from pha4ge/hAMRonization

    Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

    Python

  6. hAMRonization_workflow hAMRonization_workflow Public

    Forked from pha4ge/hAMRonization_workflow

    Harmonization of AMR predictor tool outputs

    Python