Merge branch 'master' into interpolation #1499

	name: "Generate coverage report"

	on: [push]

	jobs:
	build:
	runs-on: ubuntu-latest
	timeout-minutes: 30

	steps:
	- uses: actions/checkout@v3
	- name: Install FFmpeg
	continue-on-error: true
	run: \|
	sudo apt-get install ffmpeg

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: '3.11'

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install -r tests/requirements_full.txt
	pip install -r tests/requirements.txt

	- name: Generate serial coverage report
	env:
	NUMBA_DISABLE_JIT: 1
	MPLBACKEND: agg
	PYPDE_TESTRUN: 1
	run: \|
	export PYTHONPATH="${PYTHONPATH}:`pwd`"
	pytest --cov-config=pyproject.toml --cov=pde -n auto tests

	- name: Setup MPI
	uses: mpi4py/setup-mpi@v1

	- name: Generate parallel coverage report
	env:
	NUMBA_DISABLE_JIT: 1
	MPLBACKEND: agg
	PYPDE_TESTRUN: 1
	run: \|
	export PYTHONPATH="${PYTHONPATH}:`pwd`"
	pip install -r tests/requirements_mpi.txt
	mpiexec -n 2 pytest --cov-config=pyproject.toml --cov-append --cov=pde --use_mpi tests

	- name: Create coverage report
	run: \|
	coverage xml -o coverage_report.xml

	- name: Upload coverage to Codecov
	uses: codecov/codecov-action@v1
	with:
	token: ${{ secrets.CODECOV_TOKEN }}
	file: ./coverage_report.xml
	flags: unittests
	name: codecov-pydev
	fail_ci_if_error: true

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