Name		Name	Last commit message	Last commit date
Latest commit History 119 Commits
Repeat_ClassStatisitc		Repeat_ClassStatisitc
z.Util		z.Util
0.genome.stat.pl		0.genome.stat.pl
Blast.GetOntologyGene.pl		Blast.GetOntologyGene.pl
Blast.GrepNameFormOut.pl		Blast.GrepNameFormOut.pl
Blast.GrepNameFormOut.pl.tmp		Blast.GrepNameFormOut.pl.tmp
Blast.anno.pl		Blast.anno.pl
Blast.grep.result.pl		Blast.grep.result.pl
Blast.nr2go.pl		Blast.nr2go.pl
Blast.phase.pl		Blast.phase.pl
Blast.swissport2go.pl		Blast.swissport2go.pl
Calculate.dadi.res.pl		Calculate.dadi.res.pl
Command.Angsd.pl		Command.Angsd.pl
Command.Bamdst.pl		Command.Bamdst.pl
Command.Bwa-mem2.pl		Command.Bwa-mem2.pl
Command.Fastp.pl		Command.Fastp.pl
Command.GATK3.8.pl		Command.GATK3.8.pl
Command.GATK4.pl		Command.GATK4.pl
Command.GenMappability.pl		Command.GenMappability.pl
Command.IndexGenome.pl		Command.IndexGenome.pl
Command.King.pl		Command.King.pl
Command.Mcmctree2.pl		Command.Mcmctree2.pl
Command.Picard.pl		Command.Picard.pl
Command.Plink.F.pl		Command.Plink.F.pl
Command.Psmc.pl		Command.Psmc.pl
Command.RnaSeqBase.pl		Command.RnaSeqBase.pl
Command.Trandecorder.pl		Command.Trandecorder.pl
Command.Trinity.pl		Command.Trinity.pl
Command.Wtdbg2.pl		Command.Wtdbg2.pl
Convert.Wig2Bed.pl		Convert.Wig2Bed.pl
ConvertTypeByClustalw.pl		ConvertTypeByClustalw.pl
Creat.0fold-4fold.sites.pl		Creat.0fold-4fold.sites.pl
Creat.anc.fa.pl		Creat.anc.fa.pl
Creat.fa.from.vcf.pl		Creat.fa.from.vcf.pl
Fasta.convert.bed.window.bamdst.pl		Fasta.convert.bed.window.bamdst.pl
Fasta.filter.cdspep.pl		Fasta.filter.cdspep.pl
Fasta.filter.longest.cdspep.batch.pl		Fasta.filter.longest.cdspep.batch.pl
Fasta.filter.longest.cdspep.pl		Fasta.filter.longest.cdspep.pl
Fasta.phase.interproscan.pl		Fasta.phase.interproscan.pl
Fasta.split.N.pl		Fasta.split.N.pl
Fasta.split.seq_len.pl		Fasta.split.seq_len.pl
Fasta.split.seq_num.pl		Fasta.split.seq_num.pl
Fasta.stat.gc.ratio.pl		Fasta.stat.gc.ratio.pl
Fasta.stat.len.N.pl		Fasta.stat.len.N.pl
Fasta.stat.len.pl		Fasta.stat.len.pl
Fasta2Paml.pl		Fasta2Paml.pl
GATK.remove.hdfilter.pl		GATK.remove.hdfilter.pl
Gff.Count.Homo.gene.structure.length.pl		Gff.Count.Homo.gene.structure.length.pl
Gff.Count.commongff.gene.structure.length.pl		Gff.Count.commongff.gene.structure.length.pl
Gff3.convert.bed.allcds.pl		Gff3.convert.bed.allcds.pl
Gff3.convert.bed.mcscan.pl		Gff3.convert.bed.mcscan.pl
Gff3.rename.pl		Gff3.rename.pl
Phase.coord.repeatproteinmask.pl		Phase.coord.repeatproteinmask.pl
Phase.go.background.clustprofile.pl		Phase.go.background.clustprofile.pl
Phase.go.background.tbtools.pl		Phase.go.background.tbtools.pl
Phase.kobas2gokegg.pl		Phase.kobas2gokegg.pl
Phase.merge.go.background.pl		Phase.merge.go.background.pl
Phase.repeat2unrepeat.py		Phase.repeat2unrepeat.py
Plot.pafCoordsDotPlotly.R		Plot.pafCoordsDotPlotly.R
README.md		README.md
Stat.bamdst.res.pl		Stat.bamdst.res.pl
Stat.fst2fix_site.pl		Stat.fst2fix_site.pl
Stat.genome.pl		Stat.genome.pl
Stat.genome.py		Stat.genome.py
Stringtie.cal.fpkmtpm.count.pl		Stringtie.cal.fpkmtpm.count.pl
Stringtie.cal.fpkmtpm.pl		Stringtie.cal.fpkmtpm.pl
Stringtie.convert.id1.pl		Stringtie.convert.id1.pl
Stringtie.convert.id2.pl		Stringtie.convert.id2.pl
Vcf.anno.bed.window.pl		Vcf.anno.bed.window.pl
Vcf.filter.snp.v2.cfg		Vcf.filter.snp.v2.cfg
Vcf.filter.snp.v2.pl		Vcf.filter.snp.v2.pl
Vcf.fst.pl		Vcf.fst.pl
Vcf.fst.v2.pl		Vcf.fst.v2.pl
Vcf.plot.dxy.pl		Vcf.plot.dxy.pl
Vcf.plot.xpclr.pl		Vcf.plot.xpclr.pl
Vcf.plot.xpehh.pl		Vcf.plot.xpehh.pl
Vcf.plot.xpnsl.pl		Vcf.plot.xpnsl.pl
Vcf.res.xpclr.pl		Vcf.res.xpclr.pl
Vcf.res.xpehh.pl		Vcf.res.xpehh.pl
Vcf.res.xpnsl.pl		Vcf.res.xpnsl.pl
Vcf.sample.compare.pl		Vcf.sample.compare.pl
Vcf.smcpp2.split.py		Vcf.smcpp2.split.py
Vcf.split.chr.pl		Vcf.split.chr.pl
Vcf.stat.genotype.count.pl		Vcf.stat.genotype.count.pl
Vcf.stat.simplecount.pl		Vcf.stat.simplecount.pl
Vcf.stat.simplewindow.pl		Vcf.stat.simplewindow.pl
Vcf.structure.pl		Vcf.structure.pl
Vcf.tajimaD.pl		Vcf.tajimaD.pl
wgdi.pl		wgdi.pl
wgdi.pl.Bsta-Bsta.run.sh		wgdi.pl.Bsta-Bsta.run.sh
wgdi.pl.total.conf.fix.temp		wgdi.pl.total.conf.fix.temp
z.ETE3.py		z.ETE3.py
z.ETE3_class.py		z.ETE3_class.py
z.ETE3_distance.py		z.ETE3_distance.py
z.rename.augustus.pl		z.rename.augustus.pl
z.rename.genescan.pl		z.rename.genescan.pl
zz.GenomeCoverage.pl		zz.GenomeCoverage.pl
zz.MergeGenomeCoverageRes.pl		zz.MergeGenomeCoverageRes.pl

Repository files navigation

Simple script

pipeline and tools for personal use

will upload soon~

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Repository files navigation

Simple script

About

Releases

Packages

Languages

Aannaw/Simple_Script

Folders and files

Latest commit

History

Repository files navigation

Simple script

About

Resources

Stars

Watchers

Forks

Releases

Packages 0

Languages

Packages