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create Docker containers and remove envmodules #9

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create Docker containers and remove envmodules

create Docker containers and remove envmodules #9

Workflow file for this run

.github/workflows/build.yml at 80f1718
name: build
on:
push:
branches:
- master
- main
- develop
pull_request:
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.11"]
snakemake-version: ["7.32.3"]
steps:
- uses: actions/checkout@v4
- uses: mamba-org/setup-micromamba@v1
with:
environment-name: build
cache-environment: true
condarc: |
channels:
- conda-forge
- bioconda
create-args: >-
python=${{ matrix.python-version }}
snakemake=${{ matrix.snakemake-version }}
setuptools
pip
pytest
- name: Test
run: |
python -m pytest
env:
TMPDIR: ${{ runner.temp }}
shell: micromamba-shell {0}