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INCATools · Oct 16, 2024 · 57ab16a · 57ab16a
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diff --git a/_sources/datamodels/association/aggregator_knowledge_source.md.txt b/_sources/datamodels/association/aggregator_knowledge_source.md.txt
@@ -23,10 +23,10 @@ URI: [biolink:aggregator_knowledge_source](https://w3id.org/biolink/vocab/aggreg
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations |  no  |
-| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations |  no  |
 | [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
+| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations |  no  |
+| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
 
 

diff --git a/_sources/datamodels/association/comments.md.txt b/_sources/datamodels/association/comments.md.txt
@@ -23,9 +23,9 @@ URI: [rdfs:comment](rdfs:comment)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/evidence_type.md.txt b/_sources/datamodels/association/evidence_type.md.txt
@@ -23,9 +23,9 @@ URI: [ontoassoc:evidence_type](https://w3id.org/oak/association/evidence_type)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/negated.md.txt b/_sources/datamodels/association/negated.md.txt
@@ -23,9 +23,9 @@ URI: [ontoassoc:negated](https://w3id.org/oak/association/negated)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  yes  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  yes  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  yes  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  yes  |
 
 
 

diff --git a/_sources/datamodels/association/object.md.txt b/_sources/datamodels/association/object.md.txt
@@ -31,10 +31,10 @@ URI: [rdf:object](rdf:object)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
 | [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/object_closure.md.txt b/_sources/datamodels/association/object_closure.md.txt
@@ -23,9 +23,9 @@ URI: [ontoassoc:object_closure](https://w3id.org/oak/association/object_closure)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/object_closure_label.md.txt b/_sources/datamodels/association/object_closure_label.md.txt
@@ -23,9 +23,9 @@ URI: [ontoassoc:object_closure_label](https://w3id.org/oak/association/object_cl
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/object_label.md.txt b/_sources/datamodels/association/object_label.md.txt
@@ -27,9 +27,9 @@ URI: [sssom:object_label](https://w3id.org/sssom/object_label)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/predicate.md.txt b/_sources/datamodels/association/predicate.md.txt
@@ -29,10 +29,10 @@ URI: [rdf:predicate](rdf:predicate)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
 | [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/predicate_label.md.txt b/_sources/datamodels/association/predicate_label.md.txt
@@ -27,9 +27,9 @@ URI: [sssom:predicate_label](https://w3id.org/sssom/predicate_label)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/primary_knowledge_source.md.txt b/_sources/datamodels/association/primary_knowledge_source.md.txt
@@ -23,10 +23,10 @@ URI: [biolink:primary_knowledge_source](https://w3id.org/biolink/vocab/primary_k
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations |  no  |
-| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations |  no  |
 | [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
+| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations |  no  |
+| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
 
 

diff --git a/_sources/datamodels/association/property_values.md.txt b/_sources/datamodels/association/property_values.md.txt
@@ -23,9 +23,9 @@ URI: [ontoassoc:property_values](https://w3id.org/oak/association/property_value
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/publications.md.txt b/_sources/datamodels/association/publications.md.txt
@@ -23,10 +23,10 @@ URI: [biolink:publications](https://w3id.org/biolink/vocab/publications)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations |  no  |
+| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
 | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 | [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
-| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations |  no  |
 
 
 

diff --git a/_sources/datamodels/association/subject.md.txt b/_sources/datamodels/association/subject.md.txt
@@ -23,10 +23,10 @@ URI: [rdf:subject](rdf:subject)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations |  no  |
+| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
 | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 | [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
-| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations |  no  |
 
 
 

diff --git a/_sources/datamodels/association/subject_closure.md.txt b/_sources/datamodels/association/subject_closure.md.txt
@@ -23,9 +23,9 @@ URI: [ontoassoc:subject_closure](https://w3id.org/oak/association/subject_closur
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/subject_closure_label.md.txt b/_sources/datamodels/association/subject_closure_label.md.txt
@@ -23,9 +23,9 @@ URI: [ontoassoc:subject_closure_label](https://w3id.org/oak/association/subject_
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/subject_label.md.txt b/_sources/datamodels/association/subject_label.md.txt
@@ -27,9 +27,9 @@ URI: [sssom:subject_label](https://w3id.org/sssom/subject_label)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/association/supporting_objects.md.txt b/_sources/datamodels/association/supporting_objects.md.txt
@@ -23,9 +23,9 @@ URI: [ontoassoc:supporting_objects](https://w3id.org/oak/association/supporting_
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
-| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
 | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) |  |  no  |
+| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) |  no  |
+| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) |  no  |
 
 
 

diff --git a/_sources/datamodels/mapping-rules/description.md.txt b/_sources/datamodels/mapping-rules/description.md.txt
@@ -18,8 +18,8 @@ URI: [mappingrules:description](https://w3id.org/oak/mapping-rules-datamodel/des
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [MappingRule](MappingRule.md) | An individual mapping rule, if preconditions match the postconditions are app... |  no  |
 | [Synonymizer](Synonymizer.md) | Specification of a rule for generating a synonym or alternate lexical element |  no  |
+| [MappingRule](MappingRule.md) | An individual mapping rule, if preconditions match the postconditions are app... |  no  |
 
 
 

diff --git a/_sources/datamodels/mapping-rules/prefix.md.txt b/_sources/datamodels/mapping-rules/prefix.md.txt
@@ -19,8 +19,8 @@ URI: [mappingrules:prefix](https://w3id.org/oak/mapping-rules-datamodel/prefix)
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
 | [Test](Test.md) | A unit test for a rule, specifies an intended output for an input |  no  |
-| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements |  no  |
 | [Synonymizer](Synonymizer.md) | Specification of a rule for generating a synonym or alternate lexical element |  no  |
+| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements |  no  |
 
 
 

diff --git a/_sources/datamodels/mapping-rules/rules.md.txt b/_sources/datamodels/mapping-rules/rules.md.txt
@@ -18,8 +18,8 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules)
 
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
-| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements |  no  |
 | [MappingRuleCollection](MappingRuleCollection.md) | A collection of mapping rules |  no  |
+| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements |  no  |
 
 
 

diff --git a/_sources/datamodels/obograph/id.md.txt b/_sources/datamodels/obograph/id.md.txt
@@ -25,8 +25,8 @@ URI: [obographs:id](https://github.com/geneontology/obographs/id)
 | --- | --- | --- |
 | [SynonymTypeDefinition](SynonymTypeDefinition.md) |  |  no  |
 | [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... |  no  |
-| [Node](Node.md) | A node is a class, property, or other entity in an ontology |  no  |
 | [SubsetDefinition](SubsetDefinition.md) |  |  no  |
+| [Node](Node.md) | A node is a class, property, or other entity in an ontology |  no  |
 
 
 

diff --git a/_sources/datamodels/obograph/lang.md.txt b/_sources/datamodels/obograph/lang.md.txt
@@ -24,10 +24,10 @@ URI: [obographs:lang](https://github.com/geneontology/obographs/lang)
 | Name | Description | Modifies Slot |
 | --- | --- | --- |
 | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity |  no  |
-| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... |  no  |
-| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... |  no  |
 | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... |  no  |
+| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... |  no  |
 | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... |  no  |
+| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... |  no  |
 
 
 

diff --git a/_sources/datamodels/obograph/lbl.md.txt b/_sources/datamodels/obograph/lbl.md.txt
@@ -25,8 +25,8 @@ URI: [rdfs:label](http://www.w3.org/2000/01/rdf-schema#label)
 | --- | --- | --- |
 | [SynonymTypeDefinition](SynonymTypeDefinition.md) |  |  no  |
 | [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... |  no  |
-| [Node](Node.md) | A node is a class, property, or other entity in an ontology |  no  |
 | [SubsetDefinition](SubsetDefinition.md) |  |  no  |
+| [Node](Node.md) | A node is a class, property, or other entity in an ontology |  no  |