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Relaxation Runge-Kutta Methods #298

Merged
merged 123 commits into from
Jul 17, 2023
Merged

Relaxation Runge-Kutta Methods #298

merged 123 commits into from
Jul 17, 2023

Commits on Feb 10, 2022

  1. adding relaxation to ARKStep

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  2. remove unused file

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  3. update comments

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  4. add example input option to enable/disable relaxation

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  5. fix bug with temp vector

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Commits on Feb 11, 2022

  1. update output

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  2. add RK4

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  3. print relaxation value

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  4. fix indexing typo

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  5. add more member vars

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Commits on Mar 10, 2022

  1. Merge branch 'develop' into feature/relax

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  2. get relaxation working for ERK methods

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Commits on Aug 10, 2022

  1. Merge branch 'develop' into feature/relax 

    Conflicts:
  examples/arkode/C_serial/CMakeLists.txt
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Commits on Sep 21, 2022

  1. Merge branch 'develop' into feature/relax

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Commits on Oct 22, 2022

  1. clean up relaxation

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  2. Merge branch 'develop' into feature/relax

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Commits on Oct 24, 2022

  1. forgot to add new header

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  2. add plotting script

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Commits on Oct 25, 2022

  1. add dissipative example

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  2. ARKStep relaxation function documentation

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Commits on Oct 31, 2022

  1. Merge branch 'develop' into feature/relax

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Commits on Dec 19, 2022

  1. Merge branch 'develop' into feature/relax

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Commits on Dec 20, 2022

  1. fix typos in docs

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Commits on Jan 9, 2023

  1. Merge branch 'develop' into feature/relax

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Commits on Jan 10, 2023

  1. documentation updates

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  2. doc updates and corrections

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  3. add relax output to PrintAllStats

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  4. fix compiler warning

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Commits on Jan 11, 2023

  1. fix build error with info logging enabled

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  2. fix typo

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  3. unstash ERKStep updates

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  4. add ERKStep docs

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  5. limit max relax failures in a step

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  6. add missing returns

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  7. rename ARKRelaxationSolver

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  8. add versionadded to docs

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  9. clean up examples, fix error in Jac

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  10. check for negative b values in Butcher table

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Commits on Jan 12, 2023

  1. clean up examples

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Commits on Jan 18, 2023

  1. fix bug in loop index

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  2. use precision specific functions

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  3. fix include order dependency

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  4. add example utilites header for C examples

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  5. add fixed step option

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  6. pendulum example

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Commits on Apr 4, 2023

  1. Merge branch 'develop' into feature/relax 

    Conflicts:
  CHANGELOG.md
  doc/arkode/guide/source/Introduction.rst
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Commits on Jun 1, 2023

  1. Merge branch 'develop' into feature/relax

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  2. update submodules

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  3. fix submodule updates

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  4. add missing breaks

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  5. fix memory leak

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Commits on Jul 3, 2023

  1. Merge branch 'develop' into feature/relax 

    Conflicts:
  CHANGELOG.md
  doc/arkode/guide/source/Introduction.rst
  test/answers
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  2. debugging output

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  3. simplify interface for single relaxation equation

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Commits on Jul 4, 2023

  1. skeleton of Brent's method

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  2. change tol to res_tol, update default

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Commits on Jul 5, 2023

  1. switch to better DIRK method

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  2. add relaxation errors to failure handler

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  3. move different_sign to impl header, add same_sign

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  4. have RelaxResidual functions compute relaxed state

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  5. debugging output

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  6. unrecoverable error with fixed stepping + relaxation

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  7. use previous gamma as initial guess

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  8. add Brent's method

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  9. debugging output

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  10. Store stages for relaxation with implicit/IMEX methods 

    Storing the stages (or computing the delta_e estimate along the way) is
necesary to avoid inconsistencies between z_i, F(z_i), and J_relax(z_i) that
arise from reconstructing stages from stored RHS values like with ERK methods.
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  11. add comment about storing stages

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  12. remove some debugging output

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  13. fix delta_e in ERKStep

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  14. update table checks

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  15. revise math docs

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  16. revise usage docs

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  17. revise user supplied fn doc

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  18. sync and clean up examples

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  19. correct Norsett method

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  20. remove new include

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  21. update comment

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  22. update ERK method check

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Commits on Jul 6, 2023

  1. update table of constants

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  2. remove debugging output

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  3. reduce example output

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  4. return error if relaxation + deduce implicit RHS

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  5. add example .out files

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  6. update output for test machine

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  7. remove debugging logging output

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  8. add step length tol to Newton and tol set function

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  9. regen Fortran interfaces

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  10. update tarscript

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  11. fix doc typo

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  12. add missing file to tarscript

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  13. include current director in install tests

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  14. update answers commit

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Commits on Jul 11, 2023

  1. Merge branch 'develop' into feature/relax

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Commits on Jul 12, 2023

  1. switch to multiple of h for accpetable relax parameter range, fix inp… 

    …ut checks
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  2. remove fixed-point option

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  3. doc updates

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  4. regenerate f2003

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  5. revert change to bound factor

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Commits on Jul 13, 2023

  1. Apply suggestions from code review 

    Co-authored-by: Daniel R. Reynolds <[email protected]>
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  2. doc updates

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  3. fix typos in comments

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  4. fix compiler warnings (GCC 12)

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  5. add warnings to shared utility headers

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  6. update lrw and liw

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  7. update comment on relaxation actions

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  8. check if N_VDotProdMultiAllReduce is provided

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  9. simplify PrintAllStats

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  10. add bound fails to PrintAllStats

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  11. adjust temporary vector usage

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  12. update workspace size in output files

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  13. support fixed mass matrix

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Commits on Jul 14, 2023

  1. save stages with fixed M to reduce mass solves

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  2. add back missing b[i] after add M support

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  3. remove example utilities

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  4. add note about mass matrix support

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  5. point users to references for examples

    @gardner48
    gardner48 committed Jul 14, 2023
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  6. remove example_utilties.h from CMake files

    @gardner48
    gardner48 committed Jul 14, 2023
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  7. add back CXX example utils in CMake

    @gardner48
    gardner48 committed Jul 14, 2023
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  8. update example outputs

    @gardner48
    gardner48 committed Jul 14, 2023
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  9. udpate answers submodule commit

    @gardner48
    gardner48 committed Jul 14, 2023
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  10. update .out file for Jenkins

    @gardner48
    gardner48 committed Jul 14, 2023
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  11. fix typo in output

    @gardner48
    gardner48 committed Jul 14, 2023
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Commits on Jul 17, 2023

  1. Merge branch 'develop' into feature/relax

    @balos1
    balos1 authored Jul 17, 2023
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