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@Microbial-Ecology-Group

Microbial-Ecology-Group

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  1. AMRplusplus AMRplusplus Public

    AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resistance genes, or resistome.

    Nextflow 28 10

  2. AMRplusplus_bioinformatic_workshop AMRplusplus_bioinformatic_workshop Public

    R 5 2

  3. Antimicrobial-drug-use-effect-on-microbiome-and-resistome-of-beef-feedlots Antimicrobial-drug-use-effect-on-microbiome-and-resistome-of-beef-feedlots Public

    This repository contains all of the code required to replicate the analysis in the manuscript "METAGENOMIC INVESTIGATION OF THE EFFECTS OF ANTIMICROBIAL DRUG USE PRACTICES ON THE MICROBIOME AND RES…

    R 2

  4. Bioinformatics_resources Bioinformatics_resources Public

    R 2 1

  5. megares-db megares-db Public

    Java 1

  6. Guelph_calf_diarrhea_metagenomic_analyses Guelph_calf_diarrhea_metagenomic_analyses Public

    R

Repositories

Showing 10 of 16 repositories
  • Microbial-Ecology-Group/vero-research’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 4, 2024
  • Microbial-Ecology-Group/VARIANTplusplus’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Aug 23, 2024
  • Microbial-Ecology-Group/Full_GI_manuscript_code’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jul 5, 2024
  • AMRplusplus Public

    AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resistance genes, or resistome.

    Microbial-Ecology-Group/AMRplusplus’s past year of commit activity
    Nextflow 28 GPL-3.0 10 15 0 Updated Jun 18, 2024
  • Manuscript-Mh_TE_validation Public

    Repository for results and R code used in the manuscript...

    Microbial-Ecology-Group/Manuscript-Mh_TE_validation’s past year of commit activity
    0 0 0 0 Updated Jan 11, 2024
  • Bioinformatics_tools Public

    Repository for VERO bioinformatics tools

    Microbial-Ecology-Group/Bioinformatics_tools’s past year of commit activity
    R 0 MIT 0 0 0 Updated Dec 14, 2023
  • Microbial-Ecology-Group/TE_inputDNA_manuscript_code’s past year of commit activity
    0 0 0 0 Updated Jul 12, 2023
  • Microbial-Ecology-Group/PetRisk_manuscript_code’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jun 28, 2023
  • Microbial-Ecology-Group/Student_workspace’s past year of commit activity
    0 0 0 0 Updated May 26, 2023
  • meglab Public
    Microbial-Ecology-Group/meglab’s past year of commit activity
    HTML 0 0 0 0 Updated Jan 14, 2023

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