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|---|---|---|
| @@ -1,5 +1,6 @@ | ||
| ^.*\.Rproj$ | ||
| ^\.Rproj\.user$ | ||
| ^.travis.yml$ | ||
| deploy.sh | ||
| ^\.github$ | ||
| ^.*\.Rproj$ | ||
| ^\.Rproj\.user$ | ||
| ^.travis.yml$ | ||
| deploy.sh | ||
| ^\.github$ | ||
|
|
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| @@ -1,4 +1,4 @@ | ||
| inst/doc/* linguist-documentation | ||
| vignettes/* linguist-documentation | ||
| man/* linguist-documentation | ||
| extras/* linguist-documentation | ||
| inst/doc/* linguist-documentation | ||
| vignettes/* linguist-documentation | ||
| man/* linguist-documentation | ||
| extras/* linguist-documentation |
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| @@ -1,7 +1,2 @@ | ||
| .Rproj.user | ||
| .Rhistory | ||
| .RData | ||
| env_vars | ||
| docker-compose.yml | ||
| errorReport.txt | ||
| output/ | ||
| man/Achilles.Rd | ||
| .Rproj.user |
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| Package: Achilles | ||
| Type: Package | ||
| Title: Creates Descriptive Statistics Summary for an Entire OMOP CDM Instance | ||
| Version: 1.6.2 | ||
| Date: 2018-10-04 | ||
| Author: Patrick Ryan, Martijn Schuemie, Vojtech Huser, Chris Knoll, Ajit Londhe | ||
| Maintainer: Patrick Ryan <[email protected]> | ||
| LazyData: true | ||
| Description: Creates descriptive statistics summary for an entire OMOP CDM | ||
| instance. Since Aug 2016 only CDM v5 is actively being extended. Achilles | ||
| Heel component does data quality assesment. | ||
| Depends: | ||
| SqlRender, | ||
| DatabaseConnector (>= 2.0.0), | ||
| rjson | ||
| Suggests: | ||
| testthat, | ||
| dplyr, | ||
| R.utils, | ||
| OhdsiRTools | ||
| Remotes: | ||
| OHDSI/OhdsiRTools | ||
| License: Apache License | ||
| Roxygen: list(wrap = FALSE) | ||
| RoxygenNote: 6.1.0 | ||
| Package: Achilles | ||
| Type: Package | ||
| Title: Creates Descriptive Statistics Summary for an Entire OMOP CDM Instance | ||
| Version: 1.6.3 | ||
| Date: 2018-10-05 | ||
| Authors@R: c( | ||
| person("Patrick", "Ryan", email = "[email protected]", role = c("aut", "cre")), | ||
| person("Martijn", "Schuemie", email = "[email protected]", role = c("aut")), | ||
| person("Vojtech", "Huser", role = c("aut")), | ||
| person("Chris", "Knoll", role = c("aut")), | ||
| person("Ajit", "Londhe", email = "[email protected]", role = c("aut")), | ||
| person("Taha", "Abdul-Basser", role = c("aut")), | ||
| person("Observational Health Data Science and Informatics", role = c("cph")) | ||
| ) | ||
| Maintainer: Patrick Ryan <[email protected]> | ||
| LazyData: true | ||
| Description: Creates descriptive statistics summary for an entire OMOP CDM | ||
| instance. Since Aug 2016 only CDM v5 is actively being extended. Achilles | ||
| Heel component does data quality assesment. | ||
| Depends: | ||
| SqlRender, | ||
| DatabaseConnector (>= 2.0.0) | ||
| Imports: | ||
| dplyr, | ||
| rjson, | ||
| ParallelLogger | ||
| Suggests: | ||
| testthat, | ||
| R.utils, | ||
| shiny, | ||
| DT, | ||
| shinydashboard, | ||
| magrittr, | ||
| tidyr, | ||
| knitr, | ||
| rmarkdown | ||
| VignetteBuilder: knitr | ||
| Remotes: | ||
| OHDSI/OhdsiRTools | ||
| License: Apache License | ||
| Roxygen: list(wrap = FALSE) | ||
| RoxygenNote: 6.1.0 | ||
| Encoding: UTF-8 |
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|---|---|---|
| @@ -1,36 +1,38 @@ | ||
| # Generated by roxygen2: do not edit by hand | ||
|
|
||
| export(achilles) | ||
| export(achillesHeel) | ||
| export(addDatasource) | ||
| export(createConceptHierarchy) | ||
| export(createIndices) | ||
| export(dropAllScratchTables) | ||
| export(exportConditionEraToJson) | ||
| export(exportConditionToJson) | ||
| export(exportDashboardToJson) | ||
| export(exportDataDensityToJson) | ||
| export(exportDeathToJson) | ||
| export(exportDrugEraToJson) | ||
| export(exportDrugToJson) | ||
| export(exportHeelToJson) | ||
| export(exportMeasurementToJson) | ||
| export(exportMetaToJson) | ||
| export(exportObservationPeriodToJson) | ||
| export(exportObservationToJson) | ||
| export(exportPersonToJson) | ||
| export(exportProcedureToJson) | ||
| export(exportToJson) | ||
| export(exportVisitToJson) | ||
| export(fetchAchillesAnalysisResults) | ||
| export(fetchAchillesHeelResults) | ||
| export(getAnalysisDetails) | ||
| export(showReportTypes) | ||
| export(validateSchema) | ||
| import(DatabaseConnector) | ||
| import(SqlRender) | ||
| import(rjson) | ||
| importFrom(utils,compareVersion) | ||
| importFrom(utils,packageVersion) | ||
| importFrom(utils,read.csv) | ||
| importFrom(utils,zip) | ||
| # Generated by roxygen2: do not edit by hand | ||
|
|
||
| export(achilles) | ||
| export(achillesHeel) | ||
| export(addDataSource) | ||
| export(createConceptHierarchy) | ||
| export(createIndices) | ||
| export(dropAllScratchTables) | ||
| export(exportConditionEraToJson) | ||
| export(exportConditionToJson) | ||
| export(exportDashboardToJson) | ||
| export(exportDataDensityToJson) | ||
| export(exportDeathToJson) | ||
| export(exportDrugEraToJson) | ||
| export(exportDrugToJson) | ||
| export(exportHeelToJson) | ||
| export(exportMeasurementToJson) | ||
| export(exportMetaToJson) | ||
| export(exportObservationPeriodToJson) | ||
| export(exportObservationToJson) | ||
| export(exportPersonToJson) | ||
| export(exportProcedureToJson) | ||
| export(exportToJson) | ||
| export(exportVisitToJson) | ||
| export(fetchAchillesAnalysisResults) | ||
| export(fetchAchillesHeelResults) | ||
| export(getAnalysisDetails) | ||
| export(launchHeelResultsViewer) | ||
| export(showReportTypes) | ||
| export(validateSchema) | ||
| import(DatabaseConnector) | ||
| import(OhdsiRTools) | ||
| import(SqlRender) | ||
| import(rjson) | ||
| importFrom(utils,compareVersion) | ||
| importFrom(utils,packageVersion) | ||
| importFrom(utils,read.csv) | ||
| importFrom(utils,zip) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,5 +1,6 @@ | ||
| #' @import DatabaseConnector | ||
| #' @import SqlRender | ||
| #' @import rjson | ||
| #' @importFrom utils compareVersion packageVersion read.csv zip | ||
| NULL | ||
| #' @import DatabaseConnector | ||
| #' @import OhdsiRTools | ||
| #' @import SqlRender | ||
| #' @import rjson | ||
| #' @importFrom utils compareVersion packageVersion read.csv zip | ||
| NULL |
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