Webpage dev

.github/workflows/render_site_from_rmd.yml

@@ -0,0 +1,43 @@
+on: 
+  push:
+    branches:
+      - '**'
+  pull_request:
+    types: [opened, edited]
+    paths:
+      - '**'
+
+name: render R Markdown files to docs
+
+# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages
+permissions:
+  contents: read
+  pages: write
+  id-token: write
+
+jobs:
+  render:
+    name: render all R Markdown documents 
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+      - uses: r-lib/actions/setup-r@v2
+      - uses: r-lib/actions/setup-pandoc@v2
+      - uses: r-lib/actions/setup-tinytex@v2
+      - name: Install known depedencies  
+        run: |
+          Rscript -e "install.packages('rmarkdown')"
+      - name: render all R Markdown documents 
+        run: |
+          Rscript -e "rmarkdown::render_site('rmd/')"
+      - uses: stefanzweifel/git-auto-commit-action@v4
+      - name: Setup Pages
+        uses: actions/configure-pages@v3
+      - name: Upload artifact
+        uses: actions/upload-pages-artifact@v1
+        with:
+          # Upload entire repository
+          path: 'docs/'
+      - name: Deploy to GitHub Pages
+        id: deployment
+        uses: actions/deploy-pages@v1

.gitignore

@@ -37,3 +37,6 @@ vignettes/*.pdf
 
 # R Environment Variables
 .Renviron
+
+# Ignore mac data file
+.DS_Store

README.md

@@ -1,2 +1,4 @@
 # ImageWG
 Repository for medical image working group
+
+test

docs/favicon.html

@@ -0,0 +1 @@
+<link rel='shortcut icon' type='image/x-icon' href='favicon.ico' />