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Fix for conceptset ids in cd - requires no api change (#356)
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azimov authored Oct 1, 2024
1 parent 4d5dafc commit 306c4b4
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Showing 3 changed files with 4 additions and 5 deletions.
5 changes: 1 addition & 4 deletions R/cohort-diagnostics-conceptsInDataSource.R
Original file line number Diff line number Diff line change
Expand Up @@ -136,6 +136,7 @@ conceptsInDataSourceModule <- function(id,
selectedDatabaseIds,
targetCohortId,
selectedConceptSets,
conceptSetIds,
databaseTable = dataSource$dbTable) {
ns <- shiny::NS(id)
shiny::moduleServer(id, function(input, output, session) {
Expand All @@ -158,10 +159,6 @@ conceptsInDataSourceModule <- function(id,
return(data)
})

conceptSetIds <- shiny::reactive({
selectedConceptSets()
})

getResolvedConcepts <- shiny::reactive({
output <- resolvedConceptSet(
dataSource = dataSource,
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1 change: 1 addition & 0 deletions R/cohort-diagnostics-main.R
Original file line number Diff line number Diff line change
Expand Up @@ -667,6 +667,7 @@ cohortDiagnosticsServer <- function(id,
selectedDatabaseIds = selectedDatabaseIds,
targetCohortId = targetCohortId,
selectedConceptSets = selectedConceptSets,
conceptSetIds = conceptSetIds,
databaseTable = databaseTable)
}

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Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,8 @@ shiny::testServer(conceptsInDataSourceModule, args = list(
selectedCohort = shiny::reactive({ 14096 }),
selectedDatabaseIds = shiny::reactive({"Eunomia"}),
targetCohortId = shiny::reactive({14096}),
selectedConceptSets = shiny::reactive({ NULL })
selectedConceptSets = shiny::reactive({ NULL }),
conceptSetIds = shiny::reactive({ NULL })
), {

conceptsInDataSourceReactive()
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