Fixed missing docs and errors in roxygen

OHDSI · Jun 26, 2023 · 61c56a7 · 61c56a7
1 parent dc6b265
commit 61c56a7
Show file tree

Hide file tree

Showing 13 changed files with 121 additions and 15 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -16,6 +16,7 @@ export(cohortOverlapView)
 export(compareCohortCharacterizationView)
 export(conceptsInDataSourceView)
 export(createCdDatabaseDataSource)
+export(createCustomColDefList)
 export(dataDiagnosticDrillServer)
 export(dataDiagnosticDrillViewer)
 export(dataDiagnosticHelperFile)
@@ -99,6 +100,10 @@ export(predictionSettingsViewer)
 export(predictionValidationServer)
 export(predictionValidationViewer)
 export(predictionViewer)
+export(readColDefsFromJSON)
+export(resultTableServer)
+export(resultTableViewer)
+export(saveColDefsAsJSON)
 export(sccsDiagnosticsSummaryServer)
 export(sccsDiagnosticsSummaryViewer)
 export(sccsHelperFile)

diff --git a/R/heplers-componentsCreateCustomColDefList.R b/R/heplers-componentsCreateCustomColDefList.R
@@ -13,7 +13,7 @@
 #' @export
 #'
 #' @examples
-#' createCustomColDefList(rawColNames = c("firstName", "lastName), niceColNames = c("First Name", "Last Name"), tooltipText = c("The person's first name", "The person's last name"))
+#' createCustomColDefList(rawColNames = c("firstName", "lastName"), niceColNames = c("First Name", "Last Name"), tooltipText = c("The person's first name", "The person's last name"))
 #' 
 createCustomColDefList <- function(rawColNames, niceColNames, tooltipText) {
   withTooltip <- function(value, tooltip, ...) {
@@ -81,12 +81,11 @@ saveColDefsAsJSON <- function(colDefs, filename, path = "") {
 
 
 #' Read reactable::colDefs froma  JSON file 
-#'
+#' @description Reads in a JSON file and saves it into the environment as a named list of colDefs
 #' @param filename The dname of the input JSON file
 #' @param path The path to where the JSON is located
-#'
-#' @return
-#' @expors Reads in a JSON file and saves it into the environment as a named list of colDefs
+#' @export
+#' @return colDefs list
 #'
 readColDefsFromJSON <- function(filename, path = "") {
   # Construct the file path

diff --git a/inst/cohort-diagnostics-ref/migrations.csv b/inst/cohort-diagnostics-ref/migrations.csv
@@ -2,4 +2,4 @@ migrationFile,migrationOrder
 Migration_1-v3_1_0_time_id.sql,1
 Migration_2-v3_1_0_ir_person_years.sql,2
 Migration_3-v3_2_0_suport_cohort_subsets.sql,3
-Migration_4-v3_2_1_cohort_name_field.sql,4
+Migration_4-v3_2_1_cohort_name_field.sql,4
diff --git a/man/cohortGeneratorHelperFile.Rd b/man/cohortGeneratorHelperFile.Rd
diff --git a/man/cohortGeneratorServer.Rd b/man/cohortGeneratorServer.Rd
diff --git a/man/cohortGeneratorViewer.Rd b/man/cohortGeneratorViewer.Rd
diff --git a/man/createCustomColDefList.Rd b/man/createCustomColDefList.Rd
diff --git a/man/phevaluatorServer.Rd b/man/phevaluatorServer.Rd
diff --git a/man/phevaluatorViewer.Rd b/man/phevaluatorViewer.Rd
diff --git a/man/readColDefsFromJSON.Rd b/man/readColDefsFromJSON.Rd
diff --git a/man/resultTableServer.Rd b/man/resultTableServer.Rd
diff --git a/man/resultTableViewer.Rd b/man/resultTableViewer.Rd
diff --git a/man/saveColDefsAsJSON.Rd b/man/saveColDefsAsJSON.Rd