Develop #346
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Develop #346
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temp fix for CohortMethod module automatically opening help link - disabling link
- added message when generating - added trycatch when target cohort json has issues (subset?) - added chunk names for debugging
protocol generator fix
…ard plots and to be colorblind-friendly
- adding home module
splitting up column definition for evidence synth cohort method and sccs
Fixes for query and module load
adding distinct to sccs column name pull
…yModules into es_split_cm_sccs
Dynamic module load
Incidence plot fixes
updating documentation on the html help files for all modules
fixing wrong position of selectVal = F causing tab to not show in characterization if 'Target Viewer' is not run.
fixing formatting of authors
Update DESCRIPTION
Prerelease
fixing missing schema
updating as setting id is now a character
* Fixing #302 and Filtered Data Downloads All filtered data downloads across all modules should work now, with a button styled the same as the full download. It needs to be a CSV handler though due to the reactable statte * Updating the fix Also fixed download buttons in Cohorts module, addressing #298
fixing R checks
Fixing the issue reported in #162
fixing time plot x-axis
added code to get long database names on multiple lines
adding fix for issue 168
* Fixing #300 Syntax error in code was causing an issue in the rule sequencing, leading to incorrect attrition values. thanks to @chrisknoll for all the help * fixing R check fixing R check and removing a pointless file --------- Co-authored-by: jreps <[email protected]>
* Fixing Power tables re: #114 Standardizing power table outputs to adhere to OSM standard theme (reactable via resultTableViewer and resultTableServer). Also split the tables into 2 sub-tabs for easier readability * Updating propensity score table Adding conditional formatting of colors to values to aid in interpretation, and also adding an absolute value of beta column. * Updates to propensity score plot Overlaying equipoise statistic onto the plot, and truncating cohort names in legend * Updating covariate balance plot Adding maxSDM to covariate balance plot * Updating captions and systematic error Adding to caption descriptions in figures and overlaying EASE statistic on systematic error plot * Updating systematic error Adding more descriptive filenames for plot downloads * Develop (#340) * Fixing #301 (#326) Adding alphabetical sort to DB input options * Fixing #296 (#327) Standardizing pickerInput type for database selection where multiple options are possible to improve UX. Also fixed some colDefs in Exposed Cases * Fixing #302 and Filtered Data Downloads (#332) * Fixing #302 and Filtered Data Downloads All filtered data downloads across all modules should work now, with a button styled the same as the full download. It needs to be a CSV handler though due to the reactable statte * Updating the fix Also fixed download buttons in Cohorts module, addressing #298 * Update R_CMD_check_Hades.yaml * Update R_CMD_check_Hades.yaml * Update R_CMD_check_Hades.yaml * fixing R checks fixing R checks * Update cohort-diagnostics-databaseInformation.R (#333) Fixing the issue reported in #162 * fixing issue issue_330 (#334) fixing time plot x-axis * fixing issue 167 (#335) added code to get long database names on multiple lines * Update cohort-diagnostics-timeDistributions.R (#336) adding fix for issue 168 * Update patient-level-prediction-modelSummary.R (#337) --------- Co-authored-by: Nathan Hall <[email protected]> * fixing testing errors --------- Co-authored-by: jreps <[email protected]>
removing prints
- adding testing on linux back (after setting java options)
fixing issue 211
missing values in database comparison was causing an error. This is fixed by imputing 0 when values are NA.
removing download button since it is repeated
preparing for 3.0.1 release
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