fix roxygen issues

OHDSI · Mar 4, 2024 · 72d639b · 72d639b
1 parent 2cea8fa
commit 72d639b
Show file tree

Hide file tree

Showing 7 changed files with 32 additions and 9 deletions.
diff --git a/.github/workflows/R_CMD_check_Hades.yaml b/.github/workflows/R_CMD_check_Hades.yaml
@@ -92,9 +92,6 @@ jobs:
           remotes::install_cran("covr")
         shell: Rscript {0}
 
-      - name: Setup upterm session
-        uses: lhotari/action-upterm@v1
-
       - name: Test coverage
         if: runner.os == 'Linux'
         run: covr::codecov()

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -75,5 +75,5 @@ Remotes:
     ohdsi/FeatureExtraction,
     ohdsi/ShinyAppBuilder,
     ohdsi/ResultModelManager,
-RoxygenNote: 7.2.3
+RoxygenNote: 7.3.1
 Encoding: UTF-8
diff --git a/R/HelperFunctions.R b/R/HelperFunctions.R
@@ -1,6 +1,8 @@
 # fix issue with nrow - temp fix for me locally
 nrow <- function(x){UseMethod("nrow",x)}
+#' @exportS3Method NULL
 nrow.default <- base::nrow
+#' @exportS3Method NULL
 nrow.tbl <- function(x){x %>% dplyr::tally() %>% dplyr::pull()}
 
 

diff --git a/R/PatientLevelPrediction.R b/R/PatientLevelPrediction.R
@@ -20,12 +20,11 @@
 #' 
 #' @description A package for running predictions using data in the OMOP CDM
 #'
-#' @docType package
 #' @name PatientLevelPrediction
 #' @keywords internal
 #' @importFrom dplyr %>%
 #' @importFrom rlang .data
-NULL
+"_PACKAGE"
 
 #' A simulation profile
 #' @docType data

diff --git a/man/PatientLevelPrediction.Rd b/man/PatientLevelPrediction.Rd
diff --git a/man/createCohortCovariateSettings.Rd b/man/createCohortCovariateSettings.Rd
diff --git a/man/getCohortCovariateData.Rd b/man/getCohortCovariateData.Rd