ATC_modification #545
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ATC_modification #545
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this script populates the following tables: drug_concept_stage, internal_relationship_stage, and relationship_to_concept with the use of concept_manual, concept_relationship_manual and class_drugs_scraper.
refactoring
minor changes, code refactoring
amendments and refactoring
code improvement
code improvement
code refactoring
refactoring
hardhouse
previously approved these changes
Oct 4, 2021
datatype FLOAT has changed to NUMERIC
manual tables added
manual work
dimshitc
requested changes
Jan 28, 2022
| 'A' AS change_type | ||
| FROM atc_addendum_MMYY; | ||
| ``` | ||
| **Scenario B** - changes of the existing ATC codes |
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to add:
and issign the corresponing change_type to the existing concepts that has to be modified. See how to do this in chapter 2.1Types of ATC official updates of book of OHDSI and ATC
| 4. Using the **class_drugs_scraper** table, add new codes with _OMOPized names_ and their *original versions* to the **concept_manual** and **concept_synonym_manual** tables respectively |
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Is there a script for this? if yes, name it here. (so people will know how to do that)
| SELECT devv5.genericupdate(); | ||
| ``` | ||
| 10. Perform **post-processing**: |
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add: which builds the ancestry
| PERFORM VOCABULARY_PACK.pConceptAncestor(IS_SMALL=>TRUE); | ||
| END $_$; | ||
| ``` |
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Before we can enjoy the fresh new vocabulary, we need to look at various checks.
Let's see what both of us (Polina and Dima) have
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The ATC refresh process is formalized and documented here
The milestones of the refresh are mentioned in the readme file.