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Cohort Definition Validation Feature API #1929

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Cohort Definition Validation Feature API #1929

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Commits on Feb 1, 2021

  1. Added Annotation Code

    @jduke99
    jduke99 committed Feb 1, 2021
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Commits on Mar 2, 2021

  1. updating annotation code to test build.

    Saul Crumpton committed Mar 2, 2021
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Commits on Mar 31, 2021

  1. New Annotation Tables

    @jduke99
    jduke99 committed Mar 31, 2021
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Commits on Apr 1, 2021

  1. Updated Annotation

    @jduke99
    jduke99 committed Apr 1, 2021
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Commits on May 8, 2021

  1. Update CohortSample.java

    @jduke99
    jduke99 committed May 8, 2021
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Commits on May 18, 2021

  1. annotion link button now works

    Saul Crumpton committed May 18, 2021
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Commits on May 19, 2021

  1. removing results from Annotation.java

    Saul Crumpton committed May 19, 2021
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Commits on May 27, 2021

  1. trying to make saving results to annotation_results table work

    Saul Crumpton committed May 27, 2021
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  2. working annotation_results saving

    Saul Crumpton committed May 27, 2021
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Commits on Jun 2, 2021

  1. initial commit for ResultController and ResultService

    Saul Crumpton committed Jun 2, 2021
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Commits on Jun 3, 2021

  1. can now query for all results of a certain annotation ID

    Saul Crumpton committed Jun 3, 2021
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  2. added todo in AnnotationController

    Saul Crumpton committed Jun 3, 2021
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Commits on Jun 15, 2021

  1. default annotation GET now returns summary instead of full question e… 

    …ntity. Also added additional param searches
    Saul Crumpton committed Jun 15, 2021
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  2. removed some printlines, also added todo about performance

    Saul Crumpton committed Jun 15, 2021
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Commits on Jul 29, 2021

  1. moving to prepared statements for annotation_results

    Saul Crumpton committed Jul 29, 2021
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  2. working insertion and 'updating'. Tomorrow will change all QuestionID… 

    … references to QuestionSetId
    Saul Crumpton committed Jul 29, 2021
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Commits on Jul 30, 2021

  1. working results by Question Set ID, albiet slow

    Saul Crumpton committed Jul 30, 2021
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  2. querying for results based on QuestionSetId now is much faster

    Saul Crumpton committed Jul 30, 2021
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  3. adding in orderered params to all jdbcTemplate queries

    Saul Crumpton committed Jul 30, 2021
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  4. removed all instances/mentions of long and changed to int. Also fixed… 

    … super table query
    Saul Crumpton committed Jul 30, 2021
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Commits on Aug 3, 2021

  1. working getSets query

    Saul Crumpton committed Aug 3, 2021
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Commits on Aug 11, 2021

  1. creating annotation study table to aid in query speed for results sup… 

    …er table
    Saul Crumpton committed Aug 11, 2021
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Commits on Aug 12, 2021

  1. more work done on supertable- everything should be using annotation_s… 

    …tudy now
    Saul Crumpton committed Aug 12, 2021
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  2. return plain Results from the getResults endpoint

    Saul Crumpton committed Aug 12, 2021
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Commits on Aug 13, 2021

  1. changing sampleName to cohortSampleId in AnnotationController

    Saul Crumpton committed Aug 13, 2021
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  2. changing sampleName to cohortSampleId in AnnotationController pt 2

    Saul Crumpton committed Aug 13, 2021
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Commits on Aug 14, 2021

  1. complete results now querying by sampleId instead of Study ID when th… 

    …e param is passed
    Saul Crumpton committed Aug 14, 2021
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Commits on Aug 15, 2021

  1. finding samples and sets by cohort ID now uses inner join instead of … 

    …left
    Saul Crumpton committed Aug 15, 2021
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Commits on Aug 17, 2021

  1. adding answer text in additon to answer value to the super table

    Saul Crumpton committed Aug 17, 2021
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  2. setting AnswerValue now

    Saul Crumpton committed Aug 17, 2021
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Commits on Aug 18, 2021

  1. using LinkedHashSet for QuestionSet to ensure we add questions in order

    Saul Crumpton committed Aug 18, 2021
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Commits on Aug 19, 2021

  1. can now delete questionSets

    Saul Crumpton committed Aug 19, 2021
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Commits on Aug 20, 2021

  1. Adding orderby for questionSet Question retrieval

    Saul Crumpton committed Aug 20, 2021
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Commits on Aug 21, 2021

  1. checking to delete Results by annotation only instead of using questi… 

    …onid as well
    Saul Crumpton committed Aug 21, 2021
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  2. getting answer value from result instead of answer for super table

    Saul Crumpton committed Aug 21, 2021
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Commits on Aug 22, 2021

  1. Merge branch 'master' of https://github.com/OHDSI/WebAPI into annotat… 

    …ion2.0
    @charhart
    charhart committed Aug 22, 2021
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  2. merge master into annotation feature; rename flyway to reflect latest… 

    … version
    @charhart
    charhart committed Aug 22, 2021
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  3. Merge branch 'annotation2.0' of https://github.com/cahilton/WebAPI in… 

    …to annotation2.0
    @charhart
    charhart committed Aug 22, 2021
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  4. removing todo from nav service to navigate by sample name- this will … 

    …never be supported
    Saul Crumpton committed Aug 22, 2021
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  5. removing unused result link in Annotation entity

    Saul Crumpton committed Aug 22, 2021
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  6. removing unused sample_name field from annotation

    Saul Crumpton committed Aug 22, 2021
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  7. removing unused getters and setters in Annotation Entity

    Saul Crumpton committed Aug 22, 2021
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  8. removing unused imports from Annotation Entity

    Saul Crumpton committed Aug 22, 2021
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  9. removing unused code in AnnotationController, also removing only-for-… 

    …testing API endpoints
    Saul Crumpton committed Aug 22, 2021
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  10. removing todo for searching for annotation by annotationID instead of… 

    … by CohortSampleId and SubjectId and QuestionSetId
    Saul Crumpton committed Aug 22, 2021
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  11. removing unused imports from AnnotationController and AnnotationServi… 

    …ce. Also removing non-useful code and unused imports
    Saul Crumpton committed Aug 22, 2021
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  12. changing AnnotationRepository to use base findById instead of explici… 

    …t query
    Saul Crumpton committed Aug 22, 2021
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  13. updated AnswerRepository to use default findById method instead of query

    Saul Crumpton committed Aug 22, 2021
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  14. updated QuestionRepository to use default findById method instead of … 

    …manual query
    Saul Crumpton committed Aug 22, 2021
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  15. removing all chaff from Annotation Result package- unused fields etc

    Saul Crumpton committed Aug 22, 2021
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  16. updated QuestionSet to use default findById, removed unused imports a… 

    …nd fields
    Saul Crumpton committed Aug 22, 2021
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  17. removing more unused imports from QuestionSet repository

    Saul Crumpton committed Aug 22, 2021
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  18. using sequence for annotation_id instead of generated value

    Saul Crumpton committed Aug 22, 2021
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  19. using generator for all IDs in Question, QuestionSet, Answer

    Saul Crumpton committed Aug 22, 2021
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Commits on Aug 23, 2021

  1. rename annotation sequences

    @charhart
    charhart committed Aug 23, 2021
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  2. corrected sequence names for id generators of entities. Also removed … 

    …id from results table as it isn't necessary
    Saul Crumpton committed Aug 23, 2021
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Commits on Oct 20, 2021

  1. Merge branch 'OHDSI:master' into annotation2.0-cknoll

    @chrisknoll
    chrisknoll authored Oct 20, 2021
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Commits on Nov 8, 2021

  1. Merge remote-tracking branch 'remotes/upstream/master' into annotatio… 

    …n2.0-cknoll
    @chrisknoll
    chrisknoll committed Nov 8, 2021
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Commits on Nov 10, 2021

  1. Added security migration scripts. 

    Renamed end point from 'annotations' to 'annotation'
    @chrisknoll
    chrisknoll committed Nov 10, 2021
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Commits on Nov 16, 2021

  1. Merge pull request #1 from cahilton/annotation2.0-cknoll 

    Annotation2.0 cknoll
    @charhart
    charhart authored Nov 16, 2021
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