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30 Open 150 Closed
30 Open 150 Closed
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Issues list

Feature request: PharmCAT accepts no-call result from outside call file
#204 opened Dec 13, 2024 by holtjma
How to manage a phased vcf input?
#201 opened Nov 19, 2024 by ManuRodriguezCano
3
UGT1A1 *80+*28 and *80+*37 output
#197 opened Oct 22, 2024 by katrinsangkuhl
--absent-to-ref and --unspecified-to-ref
#196 opened Oct 10, 2024 by BinglanLi
@BinglanLi
Include NAT2 into main PharmCAT feature
#195 opened Oct 10, 2024 by katrinsangkuhl
@BinglanLi
4
Document genes that shouldn't be set to reference
#193 opened Aug 21, 2024 by markwoon
2
Publish to cloud tooling providers like Dockstore, AnVIL, etc feature
#188 opened Jul 22, 2024 by whaleyr
@markwoon @BinglanLi @AndreRico
9
FHIR / HL7 support feature help wanted
#186 opened Jul 10, 2024 by markwoon
3
Duplicated CYP2D6 diplotypes in matcher JSONs
#184 opened Jun 11, 2024 by BinglanLi
Capture homozygous reference INDELs based on individual positions
#182 opened Apr 24, 2024 by BinglanLi
2
PharmCAT Telemetry feature
#179 opened Mar 27, 2024 by markwoon
@markwoon
Support for various array data in tabular (CSV/TSV/XLSX) format feature help wanted
#177 opened Mar 25, 2024 by whaleyr
Phased variants in multiple phase blocks produces Unknown/Unknown and/or other bugs.
#175 opened Mar 7, 2024 by holtjma
@BinglanLi
OA and CNV Data from QuantStudio 12K Flex
#172 opened Feb 9, 2024 by Estefany2081
5
PharmCAT Annotation Error -- Triploid Genotypes
#167 opened Dec 21, 2023 by pbrennan-mvz
2
Add warning to summary table
#163 opened Nov 15, 2023 by katrinsangkuhl
@markwoon
Adding Genes to Pharmcat Report feature help wanted
#145 opened Jun 29, 2023 by pbrennan-mvz
9
Update Galaxy on PharmCAT release
#143 opened Jun 8, 2023 by markwoon
@markwoon @NimayRKumar
Add PharmCAT Docker image to GCR/Artifact Repository
#140 opened May 18, 2023 by markwoon
@markwoon
PDF Support
#132 opened Mar 16, 2023 by markwoon
2
Update warfarin workflow to include CYP4F2
#112 opened Sep 29, 2022 by markwoon
@mwcarrillo
4
Wrong representation for a CYP2D6 insertion
#106 opened Jul 12, 2022 by BinglanLi
Flag duplicate VCF entries enhancement preprocessor python Pull requests that update Python code
#93 opened Mar 5, 2022 by BinglanLi
@BinglanLi
Add option for TSV output feature reporter
#86 opened Jan 29, 2022 by whaleyr
@whaleyr
3
Support for block gVCF help wanted preprocessor python Pull requests that update Python code
#79 opened Dec 7, 2021 by BinglanLi
@BinglanLi
7
ProTip! Follow long discussions with comments:>50.