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PlasmoGenEpi

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  1. PGEcore PGEcore Public

    Core set of scripts to perform common downstream analysis functionalities for Plasmodium. Includes wrappers of tools and bespoke code to perform common tasks.

    1

  2. plasmogenepi-website plasmogenepi-website Public

    TypeScript

  3. plasmogenepi.r-universe.dev plasmogenepi.r-universe.dev Public

    The PlasmoGenEpi R Universe

  4. pmotools-python pmotools-python Public

    Python

  5. portable-microhaplotype-object portable-microhaplotype-object Public

    A schema to define the minimum amount of data needed to export a microhaplotype calling pipeline analysis with associated metadata

    Python

  6. PMO_Docs PMO_Docs Public

    Documentation for Portable Microhaplotype Object Tools

    R

Repositories

Showing 10 of 10 repositories
  • plasmodiumdrugres Public
    PlasmoGenEpi/plasmodiumdrugres’s past year of commit activity
    Nextflow 0 MIT 0 1 1 Updated Jan 30, 2025
  • PGEcore Public

    Core set of scripts to perform common downstream analysis functionalities for Plasmodium. Includes wrappers of tools and bespoke code to perform common tasks.

    PlasmoGenEpi/PGEcore’s past year of commit activity
    1 0 11 5 Updated Jan 29, 2025
  • plasmodiumdrugres-wdl Public
    PlasmoGenEpi/plasmodiumdrugres-wdl’s past year of commit activity
    0 0 0 0 Updated Jan 28, 2025
  • PMO_Docs Public

    Documentation for Portable Microhaplotype Object Tools

    PlasmoGenEpi/PMO_Docs’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jan 25, 2025
  • pmotools-python Public
    PlasmoGenEpi/pmotools-python’s past year of commit activity
    Python 0 GPL-3.0 0 3 0 Updated Jan 25, 2025
  • plasmogenepi.r-universe.dev Public

    The PlasmoGenEpi R Universe

    PlasmoGenEpi/plasmogenepi.r-universe.dev’s past year of commit activity
    0 0 0 0 Updated Jan 16, 2025
  • malaria.em Public

    Code base for malaria.em v2.0 developed by Xiaohong Li

    PlasmoGenEpi/malaria.em’s past year of commit activity
    R 0 GPL-2.0 0 0 0 Updated Jan 16, 2025
  • pmotools-app Public

    A simple web app built with Streamlit that helps users convert their data into the PMO format using the `pmotools` package.

    PlasmoGenEpi/pmotools-app’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Dec 20, 2024
  • plasmogenepi-website Public
    PlasmoGenEpi/plasmogenepi-website’s past year of commit activity
    TypeScript 0 0 0 0 Updated Nov 18, 2024
  • portable-microhaplotype-object Public

    A schema to define the minimum amount of data needed to export a microhaplotype calling pipeline analysis with associated metadata

    PlasmoGenEpi/portable-microhaplotype-object’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Sep 11, 2024

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