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Avoid false positives in bloomington matching #37

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Jan 31, 2025
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Avoid false positives in bloomington matching #37

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5 changes: 4 additions & 1 deletion scibot/extract.py
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Original file line number Diff line number Diff line change
Expand Up @@ -329,11 +329,14 @@ def find_rrids(text):
regex3 = '(.{0,32})(BDSC|BL|Bl|Bloomington)(\s?)(stock)?(\s)?(#|no|no\.)?(\s?)([0-9]{2,10})([^\w].{0,31})'
matches3 = re.findall(regex3, text)
for prefix, a, b, c, d, e, f, nums, suffix in matches3:
if nums in ['17', '21']:
# special case to avoid false positives
continue
yield prefix, f'RRID:BDSC_{nums.strip()}', f'{a}{b}{c}{d}{e}{f}{nums}', suffix

# fourth round for SAMN
regex4 = '(.{0,32})(SAMN)(\s?)([0-9]{3,15})([^\w].{0,31})'
matches4 = re.findall(regex3, text)
matches4 = re.findall(regex4, text)
for prefix, a, b, nums, suffix in matches4:
yield prefix, f'RRID:SAMN{nums.strip()}', f'{a}{b}{nums}', suffix

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