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Patch to support Quad-Base naming in read_openephys #338

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Patch to support Quad-Base naming in read_openephys #338

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5ebbe87
Patch to support Quad-Base naming in read_openephys
alejoe91 Apr 29, 2025
13c08fe
improve logic
alejoe91 Apr 29, 2025
daba846
Update QuadBase file and tests
alejoe91 Apr 29, 2025
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14 changes: 9 additions & 5 deletions src/probeinterface/neuropixels_tools.py
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Original file line number Diff line number Diff line change
Expand Up @@ -1000,13 +1000,17 @@ def read_openephys(
if len(stream_fields) > 0:
has_streams = True
streams = []
# find probe names (exclude ADC streams)
probe_names_used = []
for stream_field in stream_fields:
stream = stream_field.attrib["name"]
if "ADC" not in stream:
streams.append(stream)
# find probe names (exclude ADC streams)
probe_names_used = np.unique([stream.split("-")[0] for stream in streams])
# exclude ADC streams
if "ADC" in stream:
continue
streams.append(stream)
# find probe name (exclude "-AP"/"-LFP" from stream name)
stream = stream.replace("-AP", "").replace("-LFP", "")
if stream not in probe_names_used:
probe_names_used.append(stream)
else:
has_streams = False
probe_names_used = None
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