Townsend Lab, Yale School of Public Health
- 9 followers
- 135 College Street, New Haven, CT
- http://medicine.yale.edu/lab/townsend/
- Jeffrey.Townsend@Yale.edu
Popular repositories Loading
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cancereffectsizeR
cancereffectsizeR PubliccancereffectsizeR: an R package to measure the cancer effect size of somatic mutations
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KRAS_G12C_analysis
KRAS_G12C_analysis PublicAnalysis within The likelihood of heterogeneity or additional mutation in KRAS or associated oncogenes to compromise targeting of oncogenic KRAS G12C
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SNV_selection_intensity
SNV_selection_intensity PublicAnalyses associated with manuscript https://www.biorxiv.org/content/early/2018/02/27/229724 ... updated pipeline with R package here: https://github.com/Townsend-Lab-Yale/cancereffectsizeR
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LUAD-PhyLCT
LUAD-PhyLCT PublicCode and data for local consolidative treatement with Mahal and Yu.
R 2
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pALL-mutation-effects
pALL-mutation-effects PublicAnalysis of cancer effect in pediatric B-ALL and T-ALL, based on data from Brady 2022 (Nature Genetics)
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Repositories
- cancereffectsizeR Public
cancereffectsizeR: an R package to measure the cancer effect size of somatic mutations
Townsend-Lab-Yale/cancereffectsizeR’s past year of commit activity - paad-mapk-drivers Public
Townsend-Lab-Yale/paad-mapk-drivers’s past year of commit activity - LUSC_APOBEC_NFE2L2_ms Public
Townsend-Lab-Yale/LUSC_APOBEC_NFE2L2_ms’s past year of commit activity - Integrated_LUAD_Data_and_Code Public
A comprehensive LUAD dataset of 9424 samples with whole-genome sequence data (WGS), whole-exome sequence data (WES), and targeted sequence data (TGS), including 1082 smokers and 642 never-smokers.
Townsend-Lab-Yale/Integrated_LUAD_Data_and_Code’s past year of commit activity - pALL-mutation-effects Public
Analysis of cancer effect in pediatric B-ALL and T-ALL, based on data from Brady 2022 (Nature Genetics)
Townsend-Lab-Yale/pALL-mutation-effects’s past year of commit activity - cancer_causes_and_effects Public
Townsend-Lab-Yale/cancer_causes_and_effects’s past year of commit activity - cancer-epistasis Public
Mathematical model to estimate mutation origination and fixation dependent on somatic cancer genotypes
Townsend-Lab-Yale/cancer-epistasis’s past year of commit activity