Survival Analysis of TARGET Osteosarcoma Samples

This repository contains R code to perform Kaplan-Meier survival analysis on TARGET Osteosarcoma samples, categorized by cluster assignments. The goal is to evaluate whether survival differs significantly between groups.

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Input Files

• survival_data.tsv: Survival information for 60 TARGET Osteosarcoma samples.
• cluster_assignments_targetsamples.tsv: Cluster assignments for 75 TARGET samples.

The script uses only the overlapping 60 samples between the two datasets.

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Usage

git clone https://github.com/UCSC-Treehouse/os_kaplan_meier_plot.git

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Dependencies

Install the required R packages:

install.packages(c("survival", "survminer", "dplyr", "readr"))