added season and related classes

Added each season as an individual of the class season
adeans · Apr 2, 2024 · 761d538 · 761d538
1 parent 98c617a
commit 761d538
Showing 1 changed file with 48 additions and 3 deletions.
diff --git a/src/ontology/gallont-edit.owl b/src/ontology/gallont-edit.owl
@@ -17,9 +17,12 @@ Annotation(dcterms:description "None")
 Annotation(dcterms:license <https://creativecommons.org/publicdomain/zero/1.0/>)
 Annotation(dcterms:title "Plant Gall Ontology")
 
+Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000008>))
+Declaration(Class(<http://purl.obolibrary.org/obo/BFO_0000038>))
 Declaration(Class(<http://purl.obolibrary.org/obo/CARO_0000005>))
 Declaration(Class(<http://purl.obolibrary.org/obo/CARO_0000030>))
 Declaration(Class(<http://purl.obolibrary.org/obo/CARO_0000048>))
+Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_03000096>))
 Declaration(Class(<http://purl.obolibrary.org/obo/FLOPO_0900042>))
 Declaration(Class(<http://purl.obolibrary.org/obo/GALLONT_0000001>))
 Declaration(Class(<http://purl.obolibrary.org/obo/GALLONT_0000002>))
@@ -223,6 +226,10 @@ Declaration(Class(<http://purl.obolibrary.org/obo/PO_0030119>))
 Declaration(Class(<http://purl.obolibrary.org/obo/PO_0030121>))
 Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/BFO_0000050>))
 Declaration(ObjectProperty(<http://purl.obolibrary.org/obo/GALLONT_0000000>))
+Declaration(NamedIndividual(<http://purl.obolibrary.org/obo/NCIT_C94730>))
+Declaration(NamedIndividual(<http://purl.obolibrary.org/obo/NCIT_C94731>))
+Declaration(NamedIndividual(<http://purl.obolibrary.org/obo/NCIT_C94732>))
+Declaration(NamedIndividual(<http://purl.obolibrary.org/obo/NCIT_C94733>))
 Declaration(AnnotationProperty(dce:creator))
 Declaration(AnnotationProperty(dce:date))
 Declaration(AnnotationProperty(dcterms:date))
@@ -264,6 +271,14 @@ ObjectPropertyRange(<http://purl.obolibrary.org/obo/GALLONT_0000000> <http://pur
 #   Classes
 ############################
 
+# Class: <http://purl.obolibrary.org/obo/BFO_0000008> (<http://purl.obolibrary.org/obo/BFO_0000008>)
+
+SubClassOf(<http://purl.obolibrary.org/obo/BFO_0000008> <http://purl.obolibrary.org/obo/BFO_0000003>)
+
+# Class: <http://purl.obolibrary.org/obo/BFO_0000038> (<http://purl.obolibrary.org/obo/BFO_0000038>)
+
+SubClassOf(<http://purl.obolibrary.org/obo/BFO_0000038> <http://purl.obolibrary.org/obo/BFO_0000008>)
+
 # Class: <http://purl.obolibrary.org/obo/CARO_0000005> (anatomical space)
 
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/CARO_0000005> "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures."@en)
@@ -279,6 +294,11 @@ SubClassOf(<http://purl.obolibrary.org/obo/CARO_0000030> <http://purl.obolibrary
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CARO_0000048> "gonochoristic organism"@en)
 SubClassOf(<http://purl.obolibrary.org/obo/CARO_0000048> <http://purl.obolibrary.org/obo/OBI_0100026>)
 
+# Class: <http://purl.obolibrary.org/obo/ENVO_03000096> (season)
+
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_03000096> "season")
+SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03000096> <http://purl.obolibrary.org/obo/BFO_0000038>)
+
 # Class: <http://purl.obolibrary.org/obo/FLOPO_0900042> (succulent)
 
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/FLOPO_0900042> "A gall trait in which the gall parenchyma is juicy, as in the tissue of some fruits (for example grapes, starfruit)."@en)
@@ -1177,15 +1197,15 @@ AnnotationAssertion(rdfs:seeAlso <http://purl.obolibrary.org/obo/PO_0000055> <ht
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/PO_0005597> "A lateral meristem (PO:0020145) that has as part a single layer of cambial initial cells (PO:0000295) and their derivatives, arranged orderly in radial files."@en)
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/PO_0005597> "cambium"@en)
 
-# Class: <http://purl.obolibrary.org/obo/PO_0006018> (adaxial leaf epidermis)
+# Class: <http://purl.obolibrary.org/obo/PO_0006018> (leaf adaxial epidermis)
 
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/PO_0006018> "A portion of leaf epidermis (PO:0006016) that covers the adaxial/upper surface of a leaf."@en)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/PO_0006018> "upper leaf"@en)
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/PO_0006018> "adaxial leaf epidermis"@en)
 AnnotationAssertion(rdfs:seeAlso <http://purl.obolibrary.org/obo/PO_0006018> <https://www.inaturalist.org/observations/53324962>)
 SubClassOf(<http://purl.obolibrary.org/obo/PO_0006018> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/PO_0025034>))
 
-# Class: <http://purl.obolibrary.org/obo/PO_0006019> (abaxial leaf epidermis)
+# Class: <http://purl.obolibrary.org/obo/PO_0006019> (leaf abaxial epidermis)
 
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/PO_0006019> "A portion of leaf epidermis (PO:0006016) that covers the abaxial/lower surface of a leaf."@en)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/PO_0006019> "leaf underside"@en)
@@ -1242,7 +1262,7 @@ SubClassOf(<http://purl.obolibrary.org/obo/PO_0020049> ObjectSomeValuesFrom(<htt
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/PO_0020128> "A phyllome margin (PO:0025018) that is part of a leaf (PO:0025034)."@en)
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/PO_0020128> "leaf margin"@en)
 
-# Class: <http://purl.obolibrary.org/obo/PO_0020138> (leaf vein)
+# Class: <http://purl.obolibrary.org/obo/PO_0020138> (leaf lamina vein)
 
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/PO_0020138> "A phyllome lamina vein (PO:0025348) that is part of a leaf lamina vascular system (PO:0000048)."@en)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/PO_0020138> "leaf lamina vein"@en)
@@ -1288,4 +1308,29 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynony
 SubClassOf(<http://purl.obolibrary.org/obo/PO_0030121> <http://purl.obolibrary.org/obo/PO_0009049>)
 
 
+############################
+#   Named Individuals
+############################
+
+# Individual: <http://purl.obolibrary.org/obo/NCIT_C94730> (winter)
+
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/NCIT_C94730> "winter")
+ClassAssertion(<http://purl.obolibrary.org/obo/ENVO_03000096> <http://purl.obolibrary.org/obo/NCIT_C94730>)
+
+# Individual: <http://purl.obolibrary.org/obo/NCIT_C94731> (spring)
+
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/NCIT_C94731> "spring")
+ClassAssertion(<http://purl.obolibrary.org/obo/ENVO_03000096> <http://purl.obolibrary.org/obo/NCIT_C94731>)
+
+# Individual: <http://purl.obolibrary.org/obo/NCIT_C94732> (summer)
+
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/NCIT_C94732> "summer")
+ClassAssertion(<http://purl.obolibrary.org/obo/ENVO_03000096> <http://purl.obolibrary.org/obo/NCIT_C94732>)
+
+# Individual: <http://purl.obolibrary.org/obo/NCIT_C94733> (autumn)
+
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/NCIT_C94733> "autumn")
+ClassAssertion(<http://purl.obolibrary.org/obo/ENVO_03000096> <http://purl.obolibrary.org/obo/NCIT_C94733>)
+
+
 )