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  1. LincolnSteinLab/oncoGAN LincolnSteinLab/oncoGAN Public

    A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).

    Python 30 2

  2. RFcaller RFcaller Public

    A pipeline that uses read-level features and extra trees/random forest algorithms for accurate and fast detection of somatic mutations in next generation sequencing data

    Python 3 3