Fix `minNegLogConstant` after pruning #3277

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Job	Run time
macos-12-xcode-14.2 Debug	13m 14s
macos-12-xcode-14.2 Release	13m 39s
macos-14-xcode-15.4 Debug	8m 57s
macos-14-xcode-15.4 Release	11m 56s
	47m 46s