os.replace() instead of os.rename() to save checkpoint #48
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| name: 'validate WDL' | |
| on: [pull_request] | |
| env: | |
| MINIWDL_VERSION: 1.8.0 | |
| jobs: | |
| miniwdl-check: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.7' | |
| - name: 'Install miniwdl and Run Validation Test' | |
| run: | | |
| pip install miniwdl==$MINIWDL_VERSION; | |
| ./cellbender/remove_background/tests/miniwdl_check_wdl.sh; | |
| shell: bash |