Ploidy for Foxtrot VDS [VS-1418] #5017

Job	Run time
build and push gatk docker to artifacts	1s
check if the environment has privileges	1s
Validate script WDLs using womtools	49s
Validate generated WDLs using womtools	13m 17s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	2h 7m 14s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	1h 11m 9s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	1h 30m 0s
WDL test RUN_M2_WDL on cromwell	1h 52m 55s
WDL test RUN_CNN_WDL on cromwell	2h 8m 56s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	1h 38m 38s
Java 17.0.6+10 build and test cloud	15m 47s
Java 17.0.6+10 build and test integration	30m 24s
Java 17.0.6+10 build and test unit	19m 49s
Java ${{ matrix.Java }} test on docker ${{ matrix.testType }}	0s
	11h 49m 0s

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