VS-1549 Add VAT to integration tests #5024

Job	Run time
Validate generated WDLs using womtools	13m 52s
Validate script WDLs using womtools	3m 43s
check if the environment has privileges	1s
build and push gatk docker to artifacts	2h 32m 12s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	1h 58m 37s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	1h 44m 58s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	1h 51m 57s
WDL test RUN_M2_WDL on cromwell	2h 1m 46s
WDL test RUN_CNN_WDL on cromwell	1h 5m 25s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	1h 50m 2s
Java 17.0.6+10 build and test cloud	18m 54s
Java 17.0.6+10 build and test integration	30m 50s
Java 17.0.6+10 build and test unit	21m 30s
Java 17.0.6+10 test on docker integration	36m 50s
Java 17.0.6+10 test on docker unit	24m 3s
Java 17.0.6+10 test on docker variantcalling	32m 59s
Java 17.0.6+10 test on docker conda	29m 59s
	16h 37m 38s

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