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Hail backend - SV WGS #3574

Merged
merged 31 commits into from
Sep 5, 2023
Merged

Hail backend - SV WGS #3574

merged 31 commits into from
Sep 5, 2023

Commits on Aug 16, 2023

  1. Merge branch 'hail-backend-cache-globals' of https://github.com/broad… 

    …institute/seqr into hail-backend-sv
    @hanars
    hanars committed Aug 16, 2023
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Commits on Aug 17, 2023

  1. format response fields for gcnv

    @hanars
    hanars committed Aug 17, 2023
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  2. clean up merged logic

    @hanars
    hanars committed Aug 17, 2023
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  3. shared variant behavior cleanup

    @hanars
    hanars committed Aug 17, 2023
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  4. clean up

    @hanars
    hanars committed Aug 17, 2023
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  5. gcnv annotation search

    @hanars
    hanars committed Aug 17, 2023
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  6. clean up

    @hanars
    hanars committed Aug 17, 2023
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  7. handle sv type formatting

    @hanars
    hanars committed Aug 17, 2023
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  8. Merge branch 'dev' of https://github.com/broadinstitute/seqr into hai… 

    …l-backend-gcnv
    @hanars
    hanars committed Aug 17, 2023
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Commits on Aug 18, 2023

  1. clean up

    @hanars
    hanars committed Aug 18, 2023
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  2. nested concordance

    @hanars
    hanars committed Aug 18, 2023
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Commits on Aug 21, 2023

  1. format enm for transcripts

    @hanars
    hanars committed Aug 21, 2023
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  2. clean up annotation formatting

    @hanars
    hanars committed Aug 21, 2023
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  3. derived enum fields

    @hanars
    hanars committed Aug 21, 2023
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  4. cpxIntervals placeholder

    @hanars
    hanars committed Aug 21, 2023
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Commits on Aug 22, 2023

  1. search cleanup

    @hanars
    hanars committed Aug 22, 2023
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  2. updae sv wgs new data format

    @hanars
    hanars committed Aug 22, 2023
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  3. share sv concordance

    @hanars
    hanars committed Aug 22, 2023
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  4. clean up

    @hanars
    hanars committed Aug 22, 2023
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  5. gcnv cleanup

    @hanars
    hanars committed Aug 22, 2023
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  6. clean up

    @hanars
    hanars committed Aug 22, 2023
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  7. codacy fix

    @hanars
    hanars committed Aug 22, 2023
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Commits on Aug 23, 2023

  1. add sv wgs test fixtures

    @hanars
    hanars committed Aug 23, 2023
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  2. add fixture data

    @hanars
    hanars committed Aug 23, 2023
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  3. pr feedback

    @hanars
    hanars committed Aug 23, 2023
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  4. fix 37 locus end and x linked search

    @hanars
    hanars committed Aug 23, 2023
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Commits on Aug 24, 2023

  1. fix sv secondary annotation filtering

    @hanars
    hanars committed Aug 24, 2023
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  2. pr feedback

    @hanars
    hanars committed Aug 24, 2023
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  3. sort tests

    @hanars
    hanars committed Aug 24, 2023
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  4. test new call filter

    @hanars
    hanars committed Aug 24, 2023
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  5. Merge branch 'dev' of https://github.com/broadinstitute/seqr into hai… 

    …l-backend-sv-wgs
    @hanars
    hanars committed Aug 24, 2023
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